Variant report

Variant	rs578055588
Chromosome Location	chr11:121006055-121006056
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv524	chr11:120963503-121008167	Weak transcription ZNF genes & repeats Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	esv3402556	chr11:121005842-121010040	Weak transcription Enhancers Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:120993200-121008000	Weak transcription	Stomach Smooth Muscle	stomach
2	chr11:120994000-121016200	Weak transcription	Brain Substantia Nigra	brain
3	chr11:120994400-121042400	Weak transcription	Brain Hippocampus Middle	brain
4	chr11:120996800-121016400	Weak transcription	Ovary	ovary
5	chr11:120996800-121037800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
6	chr11:120998400-121007800	Weak transcription	Fetal Brain Male	brain
7	chr11:120998800-121007800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr11:120998800-121009400	Weak transcription	Spleen	Spleen
9	chr11:120999000-121007800	Weak transcription	Gastric	stomach
10	chr11:120999000-121011200	Weak transcription	Aorta	Aorta
11	chr11:120999200-121016200	Weak transcription	Brain Cingulate Gyrus	brain
12	chr11:120999600-121007800	Weak transcription	Brain Germinal Matrix	brain
13	chr11:120999600-121041600	Weak transcription	Brain Anterior Caudate	brain
14	chr11:121000000-121025200	Weak transcription	Brain Inferior Temporal Lobe	brain
15	chr11:121001000-121008400	Weak transcription	Fetal Brain Female	brain
16	chr11:121001200-121007800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr11:121001200-121012000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
18	chr11:121001400-121028000	Weak transcription	Fetal Stomach	stomach
19	chr11:121003200-121007800	Weak transcription	Pancreas	Pancrea
20	chr11:121004400-121007000	Enhancers	Fetal Muscle Leg	muscle
21	chr11:121005000-121006600	Enhancers	Fetal Heart	heart
22	chr11:121005200-121006400	Enhancers	Skeletal Muscle Male	skeletal muscle
23	chr11:121005200-121006600	Enhancers	HSMMtube	muscle
24	chr11:121005600-121006400	Enhancers	Right Ventricle	heart
25	chr11:121005800-121023600	Weak transcription	Left Ventricle	heart
26	chr11:121006000-121006200	Weak transcription	Right Atrium	heart
27	chr11:121006000-121024800	Weak transcription	Skeletal Muscle Female	skeletal muscle

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