The 2.0 version of rSNPBase

Variant report

Variant rs578131738
Chromosome Location chr1:94513576-94513577
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94505600-94514200 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr1:94505800-94523600 Weak transcription Psoas Muscle Psoas
3 chr1:94508800-94513600 Enhancers HUVEC blood vessel
4 chr1:94509600-94516800 Enhancers Fetal Muscle Leg muscle
5 chr1:94509800-94514800 Enhancers Placenta Placenta
6 chr1:94509800-94515800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr1:94509800-94516800 Enhancers Fetal Adrenal Gland Adrenal Gland
8 chr1:94510000-94514600 Enhancers Left Ventricle heart
9 chr1:94510000-94517400 Enhancers NHDF-Ad bronchial
10 chr1:94510400-94515200 Weak transcription Fetal Lung lung
11 chr1:94511000-94513800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr1:94511200-94513800 Weak transcription iPS-20b Cell Line embryonic stem cell
13 chr1:94511600-94513600 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr1:94511600-94513600 Weak transcription Aorta Aorta
15 chr1:94511600-94513800 Weak transcription HUES48 Cell Line embryonic stem cell
16 chr1:94511600-94513800 Weak transcription HUES6 Cell Line embryonic stem cell
17 chr1:94511600-94513800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr1:94511600-94513800 Enhancers Fetal Muscle Trunk muscle
19 chr1:94511600-94514000 Weak transcription H1 Cell Line embryonic stem cell
20 chr1:94511600-94514000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr1:94511600-94514000 Weak transcription Pancreas Pancrea
22 chr1:94511600-94514200 Weak transcription HSMMtube muscle
23 chr1:94511600-94514400 Weak transcription Fetal Intestine Small intestine
24 chr1:94511600-94515400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr1:94511600-94515400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr1:94511600-94515400 Weak transcription Skeletal Muscle Female skeletal muscle
27 chr1:94511600-94515400 Weak transcription A549 lung
28 chr1:94511600-94515800 Enhancers Skeletal Muscle Male skeletal muscle
29 chr1:94511600-94515800 Weak transcription Stomach Mucosa stomach
30 chr1:94511600-94515800 Weak transcription NHLF lung
31 chr1:94511600-94520800 Weak transcription Brain Angular Gyrus brain
32 chr1:94511800-94513600 Weak transcription NH-A brain
33 chr1:94511800-94514200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr1:94511800-94515200 Weak transcription HMEC breast
35 chr1:94511800-94515200 Weak transcription NHEK skin
36 chr1:94511800-94515400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr1:94511800-94515800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr1:94511800-94518000 Weak transcription Fetal Stomach stomach
39 chr1:94512200-94514000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
40 chr1:94512200-94515000 Enhancers Cortex derived primary cultured neurospheres brain
41 chr1:94512400-94513800 Enhancers Lung lung
42 chr1:94512400-94514200 Enhancers Adipose Nuclei Adipose
43 chr1:94512400-94514600 Enhancers Placenta Amnion Placenta Amnion
44 chr1:94512400-94515400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr1:94512400-94515800 Enhancers Right Atrium heart
46 chr1:94512800-94516800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr1:94513000-94513800 Enhancers Right Ventricle heart
48 chr1:94513000-94516800 Enhancers Muscle Satellite Cultured Cells --
49 chr1:94513200-94513600 Enhancers Spleen Spleen
50 chr1:94513200-94514000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015