Variant report

Variant	rs578164903
Chromosome Location	chr7:64127443-64127444
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:21 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2422405	chr7:63709739-64632341	Enhancers Bivalent Enhancer Active TSS Weak transcription ZNF genes & repeats Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	59 gene(s)	inside rSNPs	diseases
2	nsv427787	chr7:63741770-64419520	Weak transcription Strong transcription Bivalent Enhancer Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
3	esv2764000	chr7:63766980-64275251	Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	33 gene(s)	inside rSNPs	diseases
4	esv2755057	chr7:63819849-64345822	Strong transcription Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	32 gene(s)	inside rSNPs	diseases
5	nsv1031703	chr7:63839601-64225952	Active TSS Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	19 gene(s)	inside rSNPs	diseases
6	nsv464518	chr7:63881238-64506904	Enhancers ZNF genes & repeats Bivalent/Poised TSS Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
7	nsv607312	chr7:63881238-64506904	Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
8	nsv888271	chr7:63961212-64295884	Strong transcription Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	21 gene(s)	inside rSNPs	diseases
9	nsv888273	chr7:63990100-64291622	Weak transcription ZNF genes & repeats Enhancers Strong transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	20 gene(s)	inside rSNPs	diseases
10	nsv888274	chr7:63990100-64331123	Strong transcription ZNF genes & repeats Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	25 gene(s)	inside rSNPs	diseases
11	nsv888275	chr7:63990100-64468590	Strong transcription Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
12	nsv888276	chr7:63990100-64511564	Strong transcription ZNF genes & repeats Weak transcription Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
13	nsv1021893	chr7:63995601-64155027	Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	13 gene(s)	inside rSNPs	diseases
14	nsv538892	chr7:63995601-64155027	ZNF genes & repeats Enhancers Active TSS Weak transcription Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	13 gene(s)	inside rSNPs	diseases
15	nsv888278	chr7:64048473-64139463	Enhancers Genic enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
16	esv3521185	chr7:64048921-64136654	Weak transcription Strong transcription Active TSS ZNF genes & repeats Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
17	esv3521187	chr7:64048921-64136654	Active TSS Transcr. at gene 5' and 3' Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
18	esv16290	chr7:64058602-64162829	Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Genic enhancers Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases
19	nsv1027615	chr7:64065943-64138253	Strong transcription Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
20	nsv888279	chr7:64094285-64331123	Strong transcription ZNF genes & repeats Enhancers Transcr. at gene 5' and 3' Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	18 gene(s)	inside rSNPs	diseases
21	nsv970856	chr7:64126256-64155821	Strong transcription Active TSS ZNF genes & repeats Weak transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:64125800-64128000	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr7:64125800-64128000	Active TSS	HSMM	muscle
3	chr7:64126000-64127600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr7:64126000-64127600	Active TSS	Fetal Brain Female	brain
5	chr7:64126000-64127600	Active TSS	Fetal Stomach	stomach
6	chr7:64126000-64127600	Active TSS	HSMMtube	muscle
7	chr7:64126000-64127600	Active TSS	K562	blood
8	chr7:64126000-64127600	Active TSS	NHLF	lung
9	chr7:64126000-64127800	Active TSS	ES-I3 Cell Line	embryonic stem cell
10	chr7:64126000-64127800	Active TSS	HUES48 Cell Line	embryonic stem cell
11	chr7:64126000-64127800	Active TSS	Thymus	Thymus
12	chr7:64126000-64128000	Active TSS	Fetal Thymus	thymus
13	chr7:64126000-64128000	Active TSS	A549	lung
14	chr7:64126000-64129400	Active TSS	GM12878-XiMat	blood
15	chr7:64126200-64127600	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
16	chr7:64126200-64127600	Active TSS	Fetal Kidney	kidney
17	chr7:64126200-64127800	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr7:64126200-64128000	Active TSS	H1 Cell Line	embryonic stem cell
19	chr7:64126200-64128000	Active TSS	HUES6 Cell Line	embryonic stem cell
20	chr7:64126200-64128400	Active TSS	iPS-20b Cell Line	embryonic stem cell
21	chr7:64126400-64127600	Active TSS	iPS-18 Cell Line	embryonic stem cell
22	chr7:64126400-64127600	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
23	chr7:64126400-64127800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
24	chr7:64126400-64128200	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
25	chr7:64126400-64128200	Active TSS	iPS-15b Cell Line	embryonic stem cell
26	chr7:64126800-64127600	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
27	chr7:64126800-64127600	Flanking Active TSS	Primary T cells fromperipheralblood	blood
28	chr7:64127000-64127600	Flanking Active TSS	Primary hematopoietic stem cells	blood
29	chr7:64127000-64127600	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
30	chr7:64127000-64127600	Active TSS	Primary mononuclear cells fromperipheralblood	Blood
31	chr7:64127000-64127600	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
32	chr7:64127000-64127600	Flanking Active TSS	Osteobl	bone
33	chr7:64127000-64127800	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
34	chr7:64127000-64128200	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
35	chr7:64127000-64128200	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
36	chr7:64127000-64128200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
37	chr7:64127000-64128200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
38	chr7:64127000-64128200	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
39	chr7:64127000-64131200	Weak transcription	Lung	lung
40	chr7:64127000-64131400	Weak transcription	Esophagus	oesophagus
41	chr7:64127000-64141200	Weak transcription	Gastric	stomach
42	chr7:64127000-64144200	Weak transcription	Small Intestine	intestine
43	chr7:64127200-64127600	Enhancers	Primary monocytes fromperipheralblood	blood
44	chr7:64127200-64127600	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
45	chr7:64127200-64127600	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
46	chr7:64127200-64127600	Enhancers	Skeletal Muscle Male	skeletal muscle
47	chr7:64127200-64127600	Flanking Active TSS	HUVEC	blood vessel
48	chr7:64127200-64127800	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
49	chr7:64127200-64127800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
50	chr7:64127200-64127800	Flanking Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood

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