Variant report

Variant rs578195844
Chromosome Location chr20:23015819-23015820
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:23013200-23016200 Weak transcription Lung lung
2 chr20:23013200-23017400 Enhancers Fetal Heart heart
3 chr20:23014600-23016200 Weak transcription Dnd41 blood
4 chr20:23015400-23016000 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr20:23015400-23016200 Bivalent/Poised TSS ES-UCSF4 Cell Line embryonic stem cell
6 chr20:23015400-23016600 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
7 chr20:23015600-23016000 Enhancers Primary hematopoietic stem cells blood
8 chr20:23015600-23016000 Bivalent/Poised TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr20:23015600-23016000 Active TSS Right Ventricle heart
10 chr20:23015600-23016400 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
11 chr20:23015600-23016400 Bivalent/Poised TSS Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr20:23015600-23016400 Bivalent Enhancer Fetal Brain Male brain
13 chr20:23015600-23016600 Bivalent Enhancer Fetal Muscle Leg muscle
14 chr20:23015800-23016000 Active TSS Pancreatic Islets Pancreatic Islet
15 chr20:23015800-23016000 Active TSS Ovary ovary
16 chr20:23015800-23016000 Bivalent/Poised TSS Stomach Smooth Muscle stomach
17 chr20:23015800-23016200 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
18 chr20:23015800-23016200 Bivalent/Poised TSS iPS DF 19.11 Cell Line embryonic stem cell
19 chr20:23015800-23016200 Bivalent/Poised TSS Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr20:23015800-23016200 Bivalent/Poised TSS Foreskin Melanocyte Primary Cells skin01 Skin
21 chr20:23015800-23016200 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
22 chr20:23015800-23016200 Bivalent/Poised TSS Brain Hippocampus Middle brain
23 chr20:23015800-23016200 Enhancers Placenta Amnion Placenta Amnion
24 chr20:23015800-23016200 Bivalent/Poised TSS Psoas Muscle Psoas
25 chr20:23015800-23016200 Active TSS Right Atrium heart
26 chr20:23015800-23016400 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr20:23015800-23016400 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
28 chr20:23015800-23016400 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
29 chr20:23015800-23016400 Bivalent/Poised TSS Brain Anterior Caudate brain
30 chr20:23015800-23016400 Bivalent/Poised TSS Brain Cingulate Gyrus brain
31 chr20:23015800-23016400 Bivalent/Poised TSS Brain Germinal Matrix brain
32 chr20:23015800-23016400 Bivalent/Poised TSS Fetal Brain Female brain
33 chr20:23015800-23016400 Bivalent Enhancer Monocytes-CD14+_RO01746 blood
34 chr20:23015800-23016600 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
35 chr20:23015800-23016600 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
36 chr20:23015800-23017600 ZNF genes & repeats Spleen Spleen

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