Variant report
Variant | rs578211566 |
---|---|
Chromosome Location | chr3:59801883-59801884 |
allele | A/G |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr3:59770400-59825200 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
2 | chr3:59778200-59811200 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
3 | chr3:59787200-59802000 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
4 | chr3:59796000-59804000 | Weak transcription | Right Atrium | heart |
5 | chr3:59796200-59803000 | Weak transcription | Fetal Muscle Trunk | muscle |
6 | chr3:59796800-59803000 | Weak transcription | Rectal Smooth Muscle | rectum |
7 | chr3:59796800-59803600 | Weak transcription | Fetal Stomach | stomach |
8 | chr3:59797000-59803000 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
9 | chr3:59797000-59803000 | Weak transcription | Brain Anterior Caudate | brain |
10 | chr3:59797000-59803600 | Weak transcription | Brain Angular Gyrus | brain |
11 | chr3:59797000-59803600 | Weak transcription | Brain Hippocampus Middle | brain |
12 | chr3:59797000-59803600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
13 | chr3:59797000-59803800 | Weak transcription | Right Ventricle | heart |
14 | chr3:59797200-59803000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
15 | chr3:59797200-59804000 | Weak transcription | Fetal Lung | lung |
16 | chr3:59797800-59803000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
17 | chr3:59798200-59802200 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
18 | chr3:59798200-59803400 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
19 | chr3:59798200-59803400 | Weak transcription | HSMMtube | muscle |
20 | chr3:59798600-59803000 | Weak transcription | Osteobl | bone |
21 | chr3:59798600-59803600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
22 | chr3:59798800-59803400 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
23 | chr3:59799000-59802600 | Weak transcription | Muscle Satellite Cultured Cells | -- |
24 | chr3:59799000-59803000 | Weak transcription | HSMM | muscle |
25 | chr3:59799200-59802600 | Weak transcription | NH-A | brain |
26 | chr3:59799200-59802800 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
27 | chr3:59799600-59802200 | Weak transcription | Fetal Brain Female | brain |
28 | chr3:59799600-59802400 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
29 | chr3:59799600-59803000 | Weak transcription | Fetal Muscle Leg | muscle |
30 | chr3:59799600-59803000 | Weak transcription | Psoas Muscle | Psoas |
31 | chr3:59799600-59803400 | Weak transcription | Brain Germinal Matrix | brain |
32 | chr3:59799600-59803600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
33 | chr3:59799800-59803000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
34 | chr3:59799800-59803000 | Weak transcription | Left Ventricle | heart |
35 | chr3:59799800-59803400 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
36 | chr3:59799800-59803400 | Weak transcription | Fetal Heart | heart |
37 | chr3:59799800-59803800 | Weak transcription | Stomach Smooth Muscle | stomach |
38 | chr3:59800000-59803400 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
39 | chr3:59801400-59802800 | Strong transcription | Primary T cells from cord blood | blood |
40 | chr3:59801400-59804000 | Weak transcription | K562 | blood |
41 | chr3:59801600-59803200 | Strong transcription | Dnd41 | blood |
42 | chr3:59801800-59802000 | Enhancers | H9 Cell Line | embryonic stem cell |
43 | chr3:59801800-59802000 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
44 | chr3:59801800-59802800 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
45 | chr3:59801800-59802800 | Enhancers | NHEK | skin |
46 | chr3:59801800-59804400 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
47 | chr3:59801800-59804600 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
48 | chr3:59801800-59804600 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
49 | chr3:59801800-59805000 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
50 | chr3:59801800-59805000 | Enhancers | HMEC | breast |