Variant report

Variant	rs578233093
Chromosome Location	chr8:107511007-107511008
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533134	chr8:107307812-107670002	Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv824701	chr8:107378298-107520063	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	esv2602152	chr8:107510405-107512046	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv2421125	chr8:107510902-107511625	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv5529	chr8:107510907-107511674	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv1172684	chr8:107510976-107511311	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv3346787	chr8:107510982-107511503	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3479762	chr8:107510995-107511524	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv3522969	chr8:107511004-107511525	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:107475400-107511600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr8:107503600-107513400	Weak transcription	Spleen	Spleen
3	chr8:107504000-107513400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr8:107505800-107513400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
5	chr8:107506200-107511600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr8:107506800-107511800	Weak transcription	GM12878-XiMat	blood
7	chr8:107508600-107511800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr8:107508800-107511800	Weak transcription	Brain Angular Gyrus	brain
9	chr8:107509200-107513400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr8:107509400-107511600	Weak transcription	NHDF-Ad	bronchial
11	chr8:107509400-107512000	Weak transcription	H9 Cell Line	embryonic stem cell
12	chr8:107510600-107511600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr8:107510800-107511200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
14	chr8:107510800-107512200	Enhancers	Breast Myoepithelial Primary Cells	Breast
15	chr8:107510800-107512600	Enhancers	Brain Anterior Caudate	brain
16	chr8:107510800-107513800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
17	chr8:107510800-107514400	Enhancers	Brain Hippocampus Middle	brain
18	chr8:107511000-107511600	Enhancers	Cortex derived primary cultured neurospheres	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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