Variant report

Variant rs578250425
Chromosome Location chr5:16524091-16524092
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:16509200-16524200 Weak transcription Brain Cingulate Gyrus brain
2 chr5:16509600-16528800 Weak transcription Brain Hippocampus Middle brain
3 chr5:16516000-16540800 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr5:16519800-16531400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr5:16520200-16524200 Weak transcription Brain Angular Gyrus brain
6 chr5:16520200-16525000 Weak transcription Gastric stomach
7 chr5:16520600-16524800 Weak transcription Thymus Thymus
8 chr5:16521000-16524400 Enhancers Fetal Heart heart
9 chr5:16521600-16539600 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr5:16522000-16524200 Strong transcription Primary T cells from cord blood blood
11 chr5:16522200-16525400 Weak transcription Lung lung
12 chr5:16522200-16528800 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr5:16522400-16524200 Enhancers Rectal Mucosa Donor 29 rectum
14 chr5:16522400-16524200 Enhancers Rectal Mucosa Donor 31 rectum
15 chr5:16522400-16529000 Weak transcription Stomach Mucosa stomach
16 chr5:16522400-16567400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr5:16522600-16528400 Weak transcription Duodenum Mucosa Duodenum
18 chr5:16522600-16530000 Weak transcription Right Atrium heart
19 chr5:16523000-16524400 Enhancers Sigmoid Colon Sigmoid Colon
20 chr5:16523000-16525000 Enhancers Primary T helper cells PMA-I stimulated --
21 chr5:16523200-16524600 Enhancers Primary T killer naive cells fromperipheralblood blood
22 chr5:16523200-16524800 Enhancers Primary T helper naive cells fromperipheralblood blood
23 chr5:16523400-16525800 Enhancers Skeletal Muscle Female skeletal muscle
24 chr5:16523400-16540800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr5:16523600-16524200 Weak transcription Colonic Mucosa Colon
26 chr5:16523600-16533800 Weak transcription Primary T helper cells fromperipheralblood blood
27 chr5:16523600-16535400 Weak transcription Pancreas Pancrea
28 chr5:16523800-16524800 Weak transcription Fetal Brain Female brain
29 chr5:16523800-16528600 Weak transcription Fetal Intestine Large intestine
30 chr5:16523800-16539000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr5:16523800-16540800 Weak transcription Primary T helper naive cells from peripheral blood blood
32 chr5:16524000-16524200 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr5:16524000-16524200 Enhancers Brain Inferior Temporal Lobe brain
34 chr5:16524000-16524200 Enhancers Stomach Smooth Muscle stomach
35 chr5:16524000-16524400 Enhancers Brain Substantia Nigra brain
36 chr5:16524000-16524400 Genic enhancers Fetal Intestine Small intestine
37 chr5:16524000-16524400 Bivalent Enhancer Fetal Muscle Trunk muscle
38 chr5:16524000-16524400 Enhancers Psoas Muscle Psoas
39 chr5:16524000-16524600 Enhancers Right Ventricle heart
40 chr5:16524000-16525600 Enhancers Left Ventricle heart
41 chr5:16524000-16525800 Enhancers Fetal Brain Male brain
42 chr5:16524000-16526400 Enhancers Primary T cells fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links