Variant report

Variant	rs57964945
Chromosome Location	chr21:45748112-45748113
allele	A/C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:62)
CpG islands
(count:0)
Chromatin interactive
region (count:3)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:62 , 50 per page) page: 1 2

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	NFATC1	chr21:45748031-45750468	GM12878	blood:	n/a	n/a
2	POLR2A	chr21:45747937-45748302	GM12878	blood:	n/a	n/a
3	POLR2A	chr21:45747100-45749312	K562	blood:	n/a	n/a
4	POLR2A	chr21:45747088-45752198	GM12892	blood:	n/a	n/a
5	POLR2A	chr21:45747233-45750701	HepG2	liver:	n/a	n/a
6	FOSL2	chr21:45747301-45751180	HepG2	liver:	n/a	chr21:45748315-45748326 chr21:45747628-45747639
7	BCL3	chr21:45748102-45750488	GM12878	blood:	n/a	chr21:45748793-45748802
8	POLR2A	chr21:45748074-45749821	K562	blood:	n/a	n/a
9	POLR2A	chr21:45746630-45754202	Hela-S3	cervix:	n/a	n/a
10	POLR2A	chr21:45747725-45750920	SK-N-MC	brain:	n/a	n/a
11	POLR2A	chr21:45748050-45748323	GM12891	blood:	n/a	n/a
12	POLR2A	chr21:45747766-45750883	PANC-1	pancreas:	n/a	n/a
13	POLR2A	chr21:45747642-45750693	U87	brain:	n/a	n/a
14	POLR2A	chr21:45747142-45753416	MCF-7	breast:	n/a	n/a
15	POLR2A	chr21:45747891-45749757	HepG2	liver:	n/a	n/a
16	POLR2A	chr21:45746701-45754372	Hela-S3	cervix:	n/a	n/a
17	POLR2A	chr21:45746537-45752092	K562	blood:	n/a	n/a
18	POLR2A	chr21:45747288-45755768	HepG2	liver:	n/a	n/a
19	POLR2A	chr21:45746764-45754899	GM12892	blood:	n/a	n/a
20	POLR2A	chr21:45747474-45752650	U87	brain:	n/a	n/a
21	POLR2A	chr21:45747421-45752230	GM12878	blood:	n/a	n/a
22	POLR2A	chr21:45748112-45749353	HepG2	liver:	n/a	n/a
23	STAT5A	chr21:45747652-45750055	GM12878	blood:	n/a	chr21:45748615-45748627
24	POLR2A	chr21:45747462-45749435	GM18505	blood:	n/a	n/a
25	POLR2A	chr21:45746673-45752639	GM12878	blood:	n/a	n/a
26	POLR2A	chr21:45747593-45749751	GM12878	blood:	n/a	n/a
27	POLR2A	chr21:45746510-45752196	K562	blood:	n/a	n/a
28	POLR2A	chr21:45746717-45752195	GM12891	blood:	n/a	n/a
29	POLR2A	chr21:45747397-45752184	GM12891	blood:	n/a	n/a
30	POLR2A	chr21:45747809-45748570	HCT-116	colon:	n/a	n/a
31	POLR2A	chr21:45747996-45750725	GM19193	blood:	n/a	n/a
32	POLR2A	chr21:45747431-45750717	GM12892	blood:	n/a	n/a
33	POLR2A	chr21:45747929-45748158	MCF10A-Er-Src	breast:	n/a	n/a
34	POU2F2	chr21:45748026-45748557	GM12891	blood:	n/a	n/a
35	POLR2A	chr21:45747354-45750900	U87	brain:	n/a	n/a
36	POLR2A	chr21:45746531-45754407	GM12892	blood:	n/a	n/a
37	MTA3	chr21:45747728-45750894	GM12878	blood:	n/a	n/a
38	POLR2A	chr21:45747467-45751405	H1-hESC	embryonic stem cell:	n/a	n/a
39	POLR2A	chr21:45747355-45749590	K562	blood:	n/a	n/a
40	POLR2A	chr21:45747986-45748583	SK-N-SH	brain:	n/a	n/a
41	PML	chr21:45747382-45748425	GM12878	blood:	n/a	n/a
42	POLR2A	chr21:45747126-45752086	PFSK-1	brain:	n/a	n/a
43	POLR2A	chr21:45747444-45751376	GM12892	blood:	n/a	n/a
44	POLR2A	chr21:45746328-45752219	K562	blood:	n/a	n/a
45	POLR2A	chr21:45747398-45753018	U87	brain:	n/a	n/a
46	POLR2A	chr21:45747527-45751216	PFSK-1	brain:	n/a	n/a
47	POLR2A	chr21:45746806-45752899	HL-60	blood:	n/a	n/a
48	POLR2A	chr21:45747559-45749711	GM18951	blood:	n/a	n/a
49	POLR2A	chr21:45748079-45749330	H1-hESC	embryonic stem cell:	n/a	n/a
50	POLR2A	chr21:45747580-45749691	ECC-1	luminal epithelium:	n/a	n/a

No data

(count:3 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr21:45747059..45748898-chr21:45852124..45853647,2	MCF-7	breast:
2	chr21:45561454..45564242-chr21:45746295..45748408,3	K562	blood:
3	chr21:45561393..45564285-chr21:45746908..45749087,3	K562	blood:

No data

Variant related genes	Relation type
ENSG00000255902	TF binding region
ENSG00000184441	TF binding region

Extended variants
information (count: 61 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs45479791	1.00[AMR][1000 genomes]
rs56825465	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57369444	1.00[AMR][1000 genomes]
rs57558702	1.00[AMR][1000 genomes]
rs57970143	1.00[AMR][1000 genomes]
rs60110149	1.00[AMR][1000 genomes]
rs60469495	1.00[AMR][1000 genomes]
rs61674714	1.00[AMR][1000 genomes]
rs73907169	1.00[AMR][1000 genomes]
rs73907175	1.00[AMR][1000 genomes]
rs8130603	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:50 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv33817	chr21:45169412-46031810	Weak transcription Bivalent/Poised TSS Enhancers Flanking Active TSS Strong transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	121 gene(s)	inside rSNPs	diseases
2	nsv1064420	chr21:45460089-45814986	Enhancers Weak transcription Active TSS Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
3	nsv544472	chr21:45460089-45814986	Weak transcription Flanking Bivalent TSS/Enh Enhancers Strong transcription Bivalent Enhancer Active TSS Genic enhancers Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
4	nsv432155	chr21:45479055-45772388	Weak transcription Enhancers Bivalent Enhancer Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
5	esv1825445	chr21:45535566-45754936	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
6	esv1817474	chr21:45540607-45773102	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	65 gene(s)	inside rSNPs	diseases
7	nsv533679	chr21:45551026-45768578	Enhancers Active TSS Weak transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	64 gene(s)	inside rSNPs	diseases
8	nsv913898	chr21:45555079-45941566	Weak transcription Enhancers Active TSS Strong transcription Genic enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	74 gene(s)	inside rSNPs	diseases
9	nsv428042	chr21:45560437-45848190	Enhancers Active TSS Genic enhancers Weak transcription Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	61 gene(s)	inside rSNPs	diseases
10	nsv459295	chr21:45629565-45849864	Genic enhancers Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	57 gene(s)	inside rSNPs	diseases
11	nsv587740	chr21:45629565-45849864	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	57 gene(s)	inside rSNPs	diseases
12	nsv913906	chr21:45657970-45818609	Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Enhancers Active TSS Weak transcription ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	51 gene(s)	inside rSNPs	diseases
13	nsv531555	chr21:45665972-45757659	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
14	esv3361489	chr21:45669073-46013747	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	69 gene(s)	inside rSNPs	diseases
15	nsv913910	chr21:45681153-45787250	Bivalent Enhancer Active TSS Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
16	nsv913911	chr21:45681153-45893907	Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
17	nsv913912	chr21:45687581-45768598	Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS Enhancers Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
18	nsv913913	chr21:45687581-45787250	Strong transcription Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
19	nsv913914	chr21:45688215-45750346	Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
20	nsv913916	chr21:45697755-45752176	Weak transcription Flanking Active TSS Active TSS Enhancers Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
21	nsv913917	chr21:45697755-45787250	Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
22	nsv913918	chr21:45697755-45941566	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Active TSS Strong transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	60 gene(s)	inside rSNPs	diseases
23	nsv913919	chr21:45699404-45752176	Strong transcription Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
24	nsv913920	chr21:45699404-45824792	Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
25	nsv913921	chr21:45699404-45854431	Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Genic enhancers Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	50 gene(s)	inside rSNPs	diseases
26	nsv913922	chr21:45699404-45893907	Genic enhancers Enhancers Strong transcription Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
27	nsv913925	chr21:45700641-45752176	Flanking Active TSS Enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
28	nsv913926	chr21:45700641-45764397	Active TSS Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
29	nsv913927	chr21:45700641-45787250	Weak transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
30	nsv913928	chr21:45700641-45811343	Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
31	nsv913929	chr21:45700641-45860912	Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	50 gene(s)	inside rSNPs	diseases
32	nsv913930	chr21:45700641-45893907	ZNF genes & repeats Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
33	nsv913931	chr21:45703660-45764397	Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
34	nsv913932	chr21:45703660-45787250	Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
35	nsv913933	chr21:45703660-45811343	ZNF genes & repeats Active TSS Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
36	nsv913935	chr21:45709153-45787250	Bivalent/Poised TSS Flanking Active TSS Strong transcription Enhancers Genic enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
37	nsv913936	chr21:45709153-45811343	Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
38	nsv913937	chr21:45709153-45865167	Genic enhancers Active TSS Enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	50 gene(s)	inside rSNPs	diseases
39	nsv913938	chr21:45712588-45787250	Bivalent Enhancer Active TSS Flanking Active TSS Enhancers Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
40	nsv913939	chr21:45712588-45818609	Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Strong transcription Enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
41	nsv913940	chr21:45712588-45893907	Strong transcription Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
42	nsv587779	chr21:45720360-45750346	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
43	nsv587780	chr21:45722442-45764397	Weak transcription Genic enhancers Strong transcription Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	32 gene(s)	inside rSNPs	diseases
44	nsv913941	chr21:45722442-45885589	ZNF genes & repeats Flanking Active TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Weak transcription Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
45	nsv1058359	chr21:45724055-45941566	Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	48 gene(s)	inside rSNPs	diseases
46	nsv1065203	chr21:45731690-45941566	Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
47	nsv544473	chr21:45731690-45941566	Flanking Active TSS Weak transcription Strong transcription Enhancers Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
48	nsv913942	chr21:45740823-45941566	Strong transcription ZNF genes & repeats Weak transcription Enhancers Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
49	nsv913943	chr21:45740823-46031810	Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	52 gene(s)	inside rSNPs	diseases
50	esv3339878	chr21:45745574-45748372	Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:120 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:45721000-45757600	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr21:45724800-45748400	Strong transcription	Dnd41	blood
3	chr21:45725000-45758000	Weak transcription	Right Atrium	heart
4	chr21:45725600-45752800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
5	chr21:45725800-45757400	Strong transcription	Thymus	Thymus
6	chr21:45726000-45749200	Strong transcription	NHLF	lung
7	chr21:45726200-45748200	Strong transcription	Rectal Mucosa Donor 29	rectum
8	chr21:45726200-45753200	Strong transcription	Fetal Stomach	stomach
9	chr21:45726400-45748400	Strong transcription	Adipose Nuclei	Adipose
10	chr21:45726400-45751600	Strong transcription	Fetal Muscle Leg	muscle
11	chr21:45726600-45748200	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr21:45726600-45748400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr21:45726600-45748600	Strong transcription	Liver	Liver
14	chr21:45726600-45749000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr21:45726600-45749400	Strong transcription	Brain Germinal Matrix	brain
16	chr21:45726600-45749400	Strong transcription	Fetal Intestine Large	intestine
17	chr21:45726600-45753200	Strong transcription	Gastric	stomach
18	chr21:45726600-45757200	Strong transcription	Fetal Intestine Small	intestine
19	chr21:45726800-45748400	Strong transcription	Right Ventricle	heart
20	chr21:45727000-45750600	Strong transcription	Fetal Brain Female	brain
21	chr21:45727200-45748400	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
22	chr21:45727600-45750200	Weak transcription	NHDF-Ad	bronchial
23	chr21:45727600-45751200	Strong transcription	Fetal Muscle Trunk	muscle
24	chr21:45727800-45751800	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
25	chr21:45729400-45752800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
26	chr21:45730000-45748400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr21:45731400-45757800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
28	chr21:45731400-45758000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr21:45731400-45758000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
30	chr21:45731400-45758000	Weak transcription	A549	lung
31	chr21:45731600-45756200	Weak transcription	Osteobl	bone
32	chr21:45731600-45758000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
33	chr21:45731800-45757600	Weak transcription	Fetal Kidney	kidney
34	chr21:45731800-45758000	Weak transcription	HSMM	muscle
35	chr21:45732600-45753600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
36	chr21:45733400-45758000	Weak transcription	Psoas Muscle	Psoas
37	chr21:45734000-45758000	Weak transcription	HUVEC	blood vessel
38	chr21:45734200-45757800	Weak transcription	Hela-S3	cervix
39	chr21:45734400-45758000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
40	chr21:45735600-45749600	Strong transcription	Spleen	Spleen
41	chr21:45735800-45748200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
42	chr21:45735800-45748400	Strong transcription	Placenta	Placenta
43	chr21:45736200-45748200	Strong transcription	Left Ventricle	heart
44	chr21:45736600-45748200	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
45	chr21:45736600-45749600	Strong transcription	Pancreas	Pancrea
46	chr21:45736600-45757200	Strong transcription	Lung	lung
47	chr21:45736800-45748400	Strong transcription	Esophagus	oesophagus
48	chr21:45737200-45748400	Strong transcription	Brain Dorsolateral Prefrontal Cortex	brain
49	chr21:45737800-45748200	Strong transcription	Brain Cingulate Gyrus	brain
50	chr21:45738200-45748800	Strong transcription	Brain Hippocampus Middle	brain

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