The 2.0 version of rSNPBase

Variant report

Variant rs57965291
Chromosome Location chr4:103220206-103220207
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:103179400-103221000 Weak transcription K562 blood
2 chr4:103181800-103230400 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr4:103182000-103255400 Weak transcription Primary T helper naive cells fromperipheralblood blood
4 chr4:103184200-103220600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr4:103186600-103229600 Weak transcription Pancreas Pancrea
6 chr4:103187200-103229400 Weak transcription Fetal Thymus thymus
7 chr4:103189200-103225400 Weak transcription Primary T helper cells PMA-I stimulated --
8 chr4:103189800-103232400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr4:103196200-103242400 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr4:103199400-103221000 Weak transcription Ovary ovary
11 chr4:103203600-103226400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr4:103204000-103228400 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr4:103207600-103221200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr4:103208200-103220600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr4:103209800-103221200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr4:103210400-103256800 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr4:103212000-103226200 Weak transcription Brain Hippocampus Middle brain
18 chr4:103214200-103224200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr4:103214800-103243200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr4:103215800-103220400 Strong transcription Hela-S3 cervix
21 chr4:103216400-103229000 Strong transcription Dnd41 blood
22 chr4:103217400-103228200 Weak transcription HMEC breast
23 chr4:103217600-103236600 Weak transcription Liver Liver
24 chr4:103217800-103220600 Strong transcription Primary T cells from cord blood blood
25 chr4:103218000-103221000 Weak transcription HUES48 Cell Line embryonic stem cell
26 chr4:103218000-103221000 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr4:103218000-103221000 Weak transcription iPS-18 Cell Line embryonic stem cell
28 chr4:103218000-103221200 Weak transcription HUES64 Cell Line embryonic stem cell
29 chr4:103218000-103242800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr4:103218200-103221000 Weak transcription H9 Cell Line embryonic stem cell
31 chr4:103218200-103239800 Weak transcription iPS-20b Cell Line embryonic stem cell
32 chr4:103218400-103221000 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr4:103218400-103224600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
34 chr4:103218600-103221200 Weak transcription ES-WA7 Cell Line embryonic stem cell
35 chr4:103218600-103224600 Weak transcription Rectal Mucosa Donor 31 rectum
36 chr4:103218600-103245800 Weak transcription Primary T cells fromperipheralblood blood
37 chr4:103219000-103225400 Weak transcription Primary B cells from cord blood blood
38 chr4:103219000-103226000 Weak transcription Placenta Placenta
39 chr4:103219200-103222600 Weak transcription Primary T helper cells fromperipheralblood blood
40 chr4:103219200-103224600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr4:103219200-103242600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
42 chr4:103219800-103220400 Enhancers Primary monocytes fromperipheralblood blood
43 chr4:103219800-103220400 Strong transcription Rectal Mucosa Donor 29 rectum
44 chr4:103219800-103220600 Enhancers Primary hematopoietic stem cells short term culture blood
45 chr4:103219800-103220600 Enhancers Monocytes-CD14+_RO01746 blood
46 chr4:103219800-103220800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr4:103220000-103220400 Enhancers Primary B cells from peripheral blood blood
48 chr4:103220000-103220400 Enhancers GM12878-XiMat blood
49 chr4:103220000-103220600 Enhancers Primary hematopoietic stem cells blood
50 chr4:103220000-103220600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015