Variant report

Variant	rs58018030
Chromosome Location	chr8:64348921-64348922
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs59111179	1.00[AMR][1000 genomes]
rs60235952	1.00[AMR][1000 genomes]
rs73265046	1.00[AMR][1000 genomes]
rs73265058	1.00[AMR][1000 genomes]
rs73269015	1.00[AMR][1000 genomes]
rs7829667	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv890967	chr8:64107847-64454446	Weak transcription Active TSS Enhancers Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:64348200-64349000	Enhancers	HUES6 Cell Line	embryonic stem cell
2	chr8:64348200-64349000	Enhancers	iPS-18 Cell Line	embryonic stem cell
3	chr8:64348400-64349200	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chr8:64348600-64349600	Weak transcription	HUES64 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links