| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
esv2754118 |
chr13:39347702-40222644 |
Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
22 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1054600 |
chr13:39801283-40545027 |
Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
16 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1054797 |
chr13:40198744-40618428 |
Enhancers Weak transcription Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv541755 |
chr13:40198744-40618428 |
Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
esv3363652 |
chr13:40199001-40221148 |
Enhancers ZNF genes & repeats Weak transcription
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv974009 |
chr13:40212255-40222785 |
Weak transcription Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv61649 |
chr13:40212717-40212726 |
Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
