The 2.0 version of rSNPBase

Variant report

Variant rs58077821
Chromosome Location chr1:227377574-227377575
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227288400-227398000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr1:227300000-227379800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr1:227329600-227380000 Weak transcription Aorta Aorta
4 chr1:227333400-227381000 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr1:227333400-227405600 Weak transcription Adipose Nuclei Adipose
6 chr1:227343200-227400400 Weak transcription A549 lung
7 chr1:227346800-227379800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr1:227346800-227403800 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr1:227346800-227405800 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr1:227346800-227406800 Weak transcription Fetal Kidney kidney
11 chr1:227347200-227378000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr1:227347800-227385800 Weak transcription Fetal Intestine Small intestine
13 chr1:227347800-227390400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr1:227348200-227377800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr1:227348200-227377800 Weak transcription HUVEC blood vessel
16 chr1:227348200-227379800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr1:227348200-227398000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr1:227348200-227398400 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr1:227348200-227401600 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr1:227348200-227408400 Weak transcription Fetal Muscle Trunk muscle
21 chr1:227348200-227412200 Weak transcription Fetal Muscle Leg muscle
22 chr1:227348400-227378000 Weak transcription Liver Liver
23 chr1:227355400-227379800 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr1:227355400-227386200 Weak transcription Brain Anterior Caudate brain
25 chr1:227359200-227379600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:227359400-227379800 Weak transcription Brain Angular Gyrus brain
27 chr1:227359400-227379800 Weak transcription Brain Cingulate Gyrus brain
28 chr1:227359400-227379800 Weak transcription Brain Inferior Temporal Lobe brain
29 chr1:227359400-227389000 Weak transcription Right Ventricle heart
30 chr1:227360800-227401200 Weak transcription Hela-S3 cervix
31 chr1:227362800-227377600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr1:227362800-227377800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr1:227362800-227379800 Weak transcription NHLF lung
34 chr1:227363000-227379600 Weak transcription Muscle Satellite Cultured Cells --
35 chr1:227363800-227380600 Weak transcription Esophagus oesophagus
36 chr1:227364000-227379800 Weak transcription HSMMtube muscle
37 chr1:227364000-227385800 Weak transcription Fetal Stomach stomach
38 chr1:227364200-227381000 Weak transcription Duodenum Mucosa Duodenum
39 chr1:227365800-227399400 Weak transcription Fetal Intestine Large intestine
40 chr1:227369000-227379600 Weak transcription HMEC breast
41 chr1:227369200-227382600 Weak transcription Fetal Brain Female brain
42 chr1:227370000-227413600 Weak transcription HUES6 Cell Line embryonic stem cell
43 chr1:227370600-227379400 Weak transcription NHDF-Ad bronchial
44 chr1:227370600-227380000 Weak transcription Gastric stomach
45 chr1:227370800-227377800 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr1:227370800-227378200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr1:227371400-227378600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr1:227371400-227381000 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr1:227371600-227380000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr1:227371600-227381600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015