The 2.0 version of rSNPBase

Variant report

Variant rs58190593
Chromosome Location chr19:19263938-19263939
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19249400-19271200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr19:19249600-19271800 Weak transcription Brain Substantia Nigra brain
3 chr19:19249600-19282600 Weak transcription NHLF lung
4 chr19:19249800-19269000 Weak transcription Brain Angular Gyrus brain
5 chr19:19249800-19271200 Weak transcription Primary hematopoietic stem cells blood
6 chr19:19249800-19280600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr19:19250000-19266800 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr19:19250600-19271800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr19:19252800-19272400 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr19:19253600-19265600 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr19:19257000-19266600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr19:19257000-19271200 Weak transcription Muscle Satellite Cultured Cells --
13 chr19:19257000-19271600 Weak transcription HUES64 Cell Line embryonic stem cell
14 chr19:19257000-19280400 Weak transcription Gastric stomach
15 chr19:19257000-19280400 Weak transcription Pancreas Pancrea
16 chr19:19257400-19266400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
17 chr19:19257400-19269000 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr19:19257800-19270000 Weak transcription Osteobl bone
19 chr19:19257800-19270400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr19:19258000-19267800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr19:19258400-19280600 Weak transcription Right Ventricle heart
22 chr19:19258600-19273000 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr19:19258800-19272600 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr19:19258800-19280400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr19:19259000-19266800 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr19:19259000-19290200 Weak transcription Colon Smooth Muscle Colon
27 chr19:19259200-19267000 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr19:19259400-19268200 Weak transcription Rectal Smooth Muscle rectum
29 chr19:19260200-19271600 Weak transcription Primary T cells fromperipheralblood blood
30 chr19:19260200-19280600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr19:19260200-19280600 Weak transcription Brain Hippocampus Middle brain
32 chr19:19260400-19266200 Weak transcription Aorta Aorta
33 chr19:19260400-19266200 Weak transcription Monocytes-CD14+_RO01746 blood
34 chr19:19260400-19267200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr19:19260400-19267400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr19:19260400-19267600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr19:19260400-19269400 Weak transcription Brain Cingulate Gyrus brain
38 chr19:19260400-19280800 Weak transcription Ovary ovary
39 chr19:19260600-19265800 Weak transcription Primary T regulatory cells fromperipheralblood blood
40 chr19:19260600-19266200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr19:19260600-19266200 Weak transcription Fetal Intestine Large intestine
42 chr19:19260600-19266200 Weak transcription Fetal Lung lung
43 chr19:19260600-19266200 Weak transcription Rectal Mucosa Donor 29 rectum
44 chr19:19260600-19266400 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr19:19260600-19266600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr19:19260600-19266800 Weak transcription Primary T helper naive cells fromperipheralblood blood
47 chr19:19260600-19266800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr19:19260600-19267400 Weak transcription Dnd41 blood
49 chr19:19260600-19270200 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr19:19260600-19270600 Weak transcription Esophagus oesophagus

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Last update: Aug 31, 2015