Variant report

Variant	rs58232071
Chromosome Location	chr8:102605267-102605268
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:102343856..102347095-chr8:102604967..102607774,3	MCF-7	breast:
2	chr8:102503587..102506004-chr8:102600065..102605597,5	MCF-7	breast:
3	chr8:102503060..102507030-chr8:102601716..102605768,5	MCF-7	breast:

Variant related genes	Relation type
ENSG00000254024	Chromatin interaction
ENSG00000083307	Chromatin interaction

rs_ID	r²[population]
rs57443168	0.90[ASN][1000 genomes]
rs60548684	0.90[ASN][1000 genomes]
rs60731358	1.00[EUR][1000 genomes]
rs60932017	1.00[EUR][1000 genomes]
rs6994300	1.00[EUR][1000 genomes]
rs7461143	1.00[EUR][1000 genomes]

Chromatin state (count:34 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:102552200-102620600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr8:102590600-102631600	Weak transcription	HUES6 Cell Line	embryonic stem cell
3	chr8:102590600-102635200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr8:102592000-102611000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
5	chr8:102594000-102611600	Weak transcription	Fetal Intestine Large	intestine
6	chr8:102594200-102612000	Weak transcription	Duodenum Mucosa	Duodenum
7	chr8:102595800-102605400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr8:102596000-102615000	Weak transcription	Stomach Mucosa	stomach
9	chr8:102597400-102606600	Weak transcription	Sigmoid Colon	Sigmoid Colon
10	chr8:102597400-102616000	Weak transcription	Gastric	stomach
11	chr8:102597400-102620600	Weak transcription	Colonic Mucosa	Colon
12	chr8:102599000-102611600	Weak transcription	Pancreas	Pancrea
13	chr8:102600600-102619200	Weak transcription	HUES64 Cell Line	embryonic stem cell
14	chr8:102601400-102612200	Weak transcription	Fetal Stomach	stomach
15	chr8:102601600-102611600	Weak transcription	Fetal Intestine Small	intestine
16	chr8:102601600-102616200	Weak transcription	Fetal Kidney	kidney
17	chr8:102602200-102608600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
18	chr8:102602400-102611200	Weak transcription	HMEC	breast
19	chr8:102602800-102611600	Weak transcription	Placenta Amnion	Placenta Amnion
20	chr8:102603000-102606200	Weak transcription	NHEK	skin
21	chr8:102603400-102607600	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
22	chr8:102603600-102606800	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
23	chr8:102603600-102607000	Strong transcription	Placenta	Placenta
24	chr8:102603800-102607000	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
25	chr8:102603800-102607000	Strong transcription	iPS-20b Cell Line	embryonic stem cell
26	chr8:102603800-102607400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
27	chr8:102603800-102607600	Strong transcription	HUES48 Cell Line	embryonic stem cell
28	chr8:102604000-102606600	Weak transcription	Rectal Mucosa Donor 29	rectum
29	chr8:102604000-102607000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
30	chr8:102604000-102612000	Weak transcription	H9 Cell Line	embryonic stem cell
31	chr8:102604000-102614600	Weak transcription	Fetal Lung	lung
32	chr8:102604200-102605800	Weak transcription	H1 Cell Line	embryonic stem cell
33	chr8:102604200-102612000	Weak transcription	Rectal Mucosa Donor 31	rectum
34	chr8:102605000-102606400	Weak transcription	Esophagus	oesophagus

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