Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10115414	0.90[ASN][1000 genomes]
rs10120897	0.88[ASN][1000 genomes]
rs10123720	0.89[ASN][1000 genomes]
rs10123776	0.89[ASN][1000 genomes]
rs10124691	0.89[ASN][1000 genomes]
rs10124821	0.89[ASN][1000 genomes]
rs11142563	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11142583	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1160741	0.88[ASN][1000 genomes]
rs1160742	0.89[ASN][1000 genomes]
rs1328143	0.82[EUR][1000 genomes]
rs1328148	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs35201133	0.81[ASN][1000 genomes]
rs4744610	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4744612	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4745025	0.88[ASN][1000 genomes]
rs4745026	0.88[ASN][1000 genomes]
rs60864427	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6560150	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7025697	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7031754	0.88[ASN][1000 genomes]
rs7032467	0.89[ASN][1000 genomes]
rs7036878	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7045063	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7048348	0.89[ASN][1000 genomes]
rs7848308	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7875629	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv893440	chr9:73225802-73434585	Enhancers Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	76 gene(s)	inside rSNPs	diseases
2	nsv6556	chr9:73304158-73363098	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
3	esv999856	chr9:73313422-73355386	Enhancers Weak transcription	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv969739	chr9:73318954-73369474	Strong transcription Enhancers Weak transcription ZNF genes & repeats	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
5	esv3341245	chr9:73353332-73358130	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:73352800-73367600	Weak transcription	Fetal Kidney	kidney

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