The 2.0 version of rSNPBase

Variant report

Variant rs58335059
Chromosome Location chr17:60057505-60057506
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:60018000-60072800 Strong transcription Breast Myoepithelial Primary Cells Breast
2 chr17:60018000-60073400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr17:60018600-60072600 Strong transcription Fetal Thymus thymus
4 chr17:60018800-60073600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr17:60020400-60073200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr17:60020600-60073000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr17:60020800-60073800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr17:60021200-60097000 Strong transcription Dnd41 blood
9 chr17:60021800-60073600 Strong transcription Primary T regulatory cells fromperipheralblood blood
10 chr17:60025400-60074200 Strong transcription Liver Liver
11 chr17:60025400-60107600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr17:60028400-60059600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr17:60032800-60058600 Weak transcription Fetal Heart heart
14 chr17:60033000-60128400 Weak transcription Stomach Mucosa stomach
15 chr17:60034800-60072800 Strong transcription Placenta Placenta
16 chr17:60035800-60064400 Strong transcription Rectal Mucosa Donor 29 rectum
17 chr17:60036000-60074000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr17:60036400-60070000 Strong transcription Rectal Mucosa Donor 31 rectum
19 chr17:60038400-60059400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr17:60040400-60058800 Weak transcription NHEK skin
21 chr17:60042600-60058400 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr17:60042600-60063600 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr17:60042800-60058600 Weak transcription Brain Substantia Nigra brain
24 chr17:60042800-60059600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr17:60042800-60059600 Weak transcription Pancreas Pancrea
26 chr17:60042800-60059800 Weak transcription Placenta Amnion Placenta Amnion
27 chr17:60042800-60105200 Weak transcription Psoas Muscle Psoas
28 chr17:60043200-60059400 Weak transcription Brain Cingulate Gyrus brain
29 chr17:60044000-60058800 Weak transcription H9 Cell Line embryonic stem cell
30 chr17:60044000-60059400 Weak transcription Fetal Brain Male brain
31 chr17:60044400-60062000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr17:60044800-60059200 Weak transcription ES-WA7 Cell Line embryonic stem cell
33 chr17:60045600-60059600 Weak transcription Brain Angular Gyrus brain
34 chr17:60046400-60062800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
35 chr17:60047000-60058400 Weak transcription HUVEC blood vessel
36 chr17:60047200-60058600 Weak transcription Gastric stomach
37 chr17:60047600-60058600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr17:60047800-60057600 Weak transcription Fetal Kidney kidney
39 chr17:60047800-60058800 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr17:60048000-60057800 Weak transcription Stomach Smooth Muscle stomach
41 chr17:60048000-60058000 Weak transcription Esophagus oesophagus
42 chr17:60048000-60058600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
43 chr17:60048000-60062000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr17:60048400-60057800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr17:60048400-60059600 Weak transcription Primary T helper naive cells from peripheral blood blood
46 chr17:60048400-60072800 Strong transcription Primary hematopoietic stem cells short term culture blood
47 chr17:60048600-60057600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
48 chr17:60048600-60074200 Strong transcription Primary monocytes fromperipheralblood blood
49 chr17:60048800-60097600 Strong transcription Monocytes-CD14+_RO01746 blood
50 chr17:60049200-60057800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015