Variant report

Variant	rs58367083
Chromosome Location	chr22:23487402-23487403
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MXI1	chr22:23486958-23488135	K562	blood:	n/a	chr22:23487465-23487480
2	E2F6	chr22:23487179-23488244	K562	blood:	n/a	chr22:23487837-23487849
3	HDAC2	chr22:23487353-23487637	HepG2	liver:	n/a	n/a
4	ATF3	chr22:23486630-23488553	K562	blood:	n/a	n/a
5	PAX5	chr22:23487270-23487995	GM12892	blood:	n/a	n/a
6	BACH1	chr22:23487179-23487852	H1-hESC	embryonic stem cell:	n/a	n/a
7	HDAC2	chr22:23486603-23489476	K562	blood:	n/a	n/a
8	NRF1	chr22:23486456-23487718	K562	blood:	n/a	chr22:23487430-23487439 chr22:23487361-23487372
9	THAP1	chr22:23487150-23488335	K562	blood:	n/a	n/a
10	SP2	chr22:23487369-23487767	K562	blood:	n/a	n/a
11	NRF1	chr22:23487011-23488202	SK-N-SH	brain:	n/a	chr22:23487430-23487439 chr22:23487361-23487372
12	MAZ	chr22:23487226-23487781	HepG2	liver:	n/a	chr22:23487429-23487439 chr22:23487465-23487474
13	POLR2A	chr22:23487167-23487413	A549	lung:	n/a	n/a
14	POLR2A	chr22:23487129-23487471	U87	brain:	n/a	n/a
15	SP1	chr22:23487207-23487831	GM12878	blood:	n/a	chr22:23487406-23487418 chr22:23487429-23487439 chr22:23487428-23487440 chr22:23487518-23487530 chr22:23487518-23487529 chr22:23487406-23487418 chr22:23487429-23487439 chr22:23487407-23487416 chr22:23487429-23487438 chr22:23487429-23487443 chr22:23487408-23487417 chr22:23487520-23487529 chr22:23487430-23487439 chr22:23487428-23487440 chr22:23487519-23487528 chr22:23487518-23487530
16	ELF1	chr22:23487184-23488023	K562	blood:	n/a	chr22:23487430-23487442
17	MAX	chr22:23487185-23487901	HepG2	liver:	n/a	chr22:23487429-23487439 chr22:23487465-23487474
18	SP1	chr22:23487234-23487836	H1-hESC	embryonic stem cell:	n/a	chr22:23487406-23487418 chr22:23487429-23487439 chr22:23487428-23487440 chr22:23487518-23487530 chr22:23487518-23487529 chr22:23487406-23487418 chr22:23487429-23487439 chr22:23487407-23487416 chr22:23487429-23487438 chr22:23487429-23487443 chr22:23487408-23487417 chr22:23487520-23487529 chr22:23487430-23487439 chr22:23487428-23487440 chr22:23487519-23487528 chr22:23487518-23487530
19	MYC	chr22:23487097-23487891	K562	blood:	n/a	chr22:23487429-23487439 chr22:23487465-23487474
20	MAX	chr22:23487400-23487998	H1-hESC	embryonic stem cell:	n/a	chr22:23487429-23487439 chr22:23487465-23487474
21	MAZ	chr22:23487006-23488603	IMR90	lung:	n/a	chr22:23487429-23487439 chr22:23487465-23487474
22	SP1	chr22:23487287-23487949	A549	lung:	n/a	chr22:23487406-23487418 chr22:23487429-23487439 chr22:23487428-23487440 chr22:23487518-23487530 chr22:23487518-23487529 chr22:23487406-23487418 chr22:23487429-23487439 chr22:23487407-23487416 chr22:23487429-23487438 chr22:23487429-23487443 chr22:23487408-23487417 chr22:23487520-23487529 chr22:23487430-23487439 chr22:23487428-23487440 chr22:23487519-23487528 chr22:23487518-23487530
23	PBX3	chr22:23487274-23487914	SK-N-SH	brain:	n/a	n/a
24	MAX	chr22:23487370-23488069	A549	lung:	n/a	chr22:23487429-23487439 chr22:23487465-23487474
25	HDAC2	chr22:23487105-23488040	K562	blood:	n/a	n/a
26	ZNF274	chr22:23486372-23488122	K562	blood:	n/a	n/a
27	POLR2A	chr22:23486882-23488434	MCF10A-Er-Src	breast:	n/a	n/a
28	HCFC1	chr22:23486827-23487930	K562	blood:	n/a	n/a
29	ZMIZ1	chr22:23486879-23488093	K562	blood:	n/a	n/a
30	ZNF143	chr22:23487062-23487902	K562	blood:	n/a	n/a
31	MXI1	chr22:23487178-23487869	HepG2	liver:	n/a	chr22:23487465-23487480
32	HEY1	chr22:23487068-23487515	HepG2	liver:	n/a	chr22:23487407-23487422
33	ELK1	chr22:23486897-23488128	K562	blood:	n/a	n/a
34	POLR2A	chr22:23487120-23487410	HCT-116	colon:	n/a	n/a
35	NFYB	chr22:23487202-23487756	K562	blood:	n/a	n/a
36	YY1	chr22:23487148-23487854	K562	blood:	n/a	chr22:23487406-23487420 chr22:23487512-23487526
37	RCOR1	chr22:23486448-23488248	K562	blood:	n/a	n/a
38	YY1	chr22:23487212-23487832	HepG2	liver:	n/a	chr22:23487406-23487420 chr22:23487512-23487526
39	POLR2A	chr22:23487127-23487956	H1-neurons	neurons:	n/a	n/a
40	TBP	chr22:23486835-23488308	K562	blood:	n/a	n/a
41	SIN3A	chr22:23487177-23488168	H1-hESC	embryonic stem cell:	n/a	chr22:23487380-23487393
42	ZNF384	chr22:23486148-23487835	K562	blood:	n/a	n/a
43	ELF1	chr22:23487291-23488146	GM12878	blood:	n/a	chr22:23487430-23487442
44	RFX5	chr22:23486905-23487767	K562	blood:	n/a	chr22:23487464-23487479 chr22:23487464-23487479
45	RCOR1	chr22:23487271-23487828	HepG2	liver:	n/a	n/a
46	HMGN3	chr22:23487066-23488043	K562	blood:	n/a	n/a
47	JUND	chr22:23486942-23487929	K562	blood:	n/a	chr22:23487739-23487747 chr22:23487150-23487159 chr22:23487737-23487748
48	MAZ	chr22:23487291-23487706	GM12878	blood:	n/a	chr22:23487429-23487439 chr22:23487465-23487474
49	SREBP1	chr22:23487323-23487795	HepG2	liver:	n/a	chr22:23487465-23487479
50	ARID3A	chr22:23487125-23487667	HepG2	liver:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr22:23487383-23487433	ovcar-3	ovarian:	n/a
2	chr22:23487383-23487433	BE2_C	brain:	n/a
3	chr22:23487383-23487433	T-47D	breast:	n/a
4	chr22:23487383-23487433	HRCEpiC	kidney:	n/a
5	chr22:23487383-23487433	HEEpiC	esophagus:	n/a
6	chr22:23487383-23487433	HRPEpiC	eye:	n/a
7	chr22:23487383-23487433	NB4	blood:	n/a
8	chr22:23487383-23487433	HCT-116	colon:	n/a
9	chr22:23487383-23487433	GM12891	blood:	n/a
10	chr22:23487383-23487433	SK-N-MC	brain:	n/a
11	chr22:23487383-23487433	RPTEC	kidney:	n/a
12	chr22:23487383-23487433	GM12878	blood:	n/a
13	chr22:23487383-23487433	PFSK-1	brain:	n/a
14	chr22:23487383-23487433	AG04450	lung:	fetal
15	chr22:23487383-23487433	SK-N-SH_RA	brain:	n/a
16	chr22:23487383-23487433	GM19239	blood:	n/a
17	chr22:23487383-23487433	HCF	heart:	n/a
18	chr22:23487383-23487433	H1-hESC	embryonic stem cell:	embryo
19	chr22:23487383-23487433	MCF-7	breast:	n/a
20	chr22:23487383-23487433	HCPEpiC	choroid plexus:	n/a
21	chr22:23487383-23487433	HPAEpiC	pulmonary alveolar:	n/a
22	chr22:23487383-23487433	AG10803	skin:	n/a
23	chr22:23487383-23487433	K562	blood:	n/a
24	chr22:23487383-23487433	HEK293	kidney:	embryo
25	chr22:23487383-23487433	NHBE	bronchial:	n/a
26	chr22:23487383-23487433	HepG2	liver:	n/a
27	chr22:23487383-23487433	SKMC	muscle:	n/a
28	chr22:23487383-23487433	AG09309	skin:	n/a
29	chr22:23487383-23487433	NHDF-neo	bronchial:	n/a
30	chr22:23487383-23487433	CMK	blood:	n/a
31	chr22:23487383-23487433	ECC-1	luminal epithelium:	n/a
32	chr22:23487383-23487433	U87	brain:	n/a
33	chr22:23487383-23487433	Jurkat	blood:	n/a
34	chr22:23487383-23487433	NH-A	brain:	n/a
35	chr22:23487383-23487433	Hepatocyte	liver:	n/a
36	chr22:23487383-23487433	PrEC	prostate:	n/a
37	chr22:23487383-23487433	Caco-2	colon:	n/a
38	chr22:23487383-23487433	Hela-S3	cervix:	n/a
39	chr22:23487383-23487433	AG04449	skin:	fetal
40	chr22:23487383-23487433	AoSMC	blood vessel:	n/a
41	chr22:23487383-23487433	ProgFib	skin:	n/a
42	chr22:23487383-23487433	AG09319	gingival:	n/a
43	chr22:23487383-23487433	HRE	kidney:	n/a
44	chr22:23487383-23487433	LNCaP	prostate:	n/a
45	chr22:23487383-23487433	SK-N-SH	brain:	n/a
46	chr22:23487383-23487433	SAEC	small airway:	n/a
47	chr22:23487383-23487433	HIPEpiC	eye:	n/a
48	chr22:23487383-23487433	MCF10A-Er-Src	breast:	n/a
49	chr22:23487383-23487433	IMR90	lung:	fetal
50	chr22:23487383-23487433	A549	lung:	n/a

No.	Distal block	Cell Line	Cell type
1	chr22:23486968..23489257-chr9:133803700..133806621,2	K562	blood:
2	chr22:22900276..22902223-chr22:23486030..23487937,2	K562	blood:
3	chr22:23410484..23412785-chr22:23485960..23488893,2	K562	blood:
4	chr22:23484062..23485814-chr22:23485870..23488963,4	K562	blood:
5	chr22:23487336..23487847-chr4:57843436..57844248,2	HCT-116	colon:

Variant related genes	Relation type
RAB36	TF binding region
RTDR1	TF binding region
RAB36	CpG island
RTDR1	CpG island
ENSG00000220891	Chromatin interaction
ENSG00000100218	Chromatin interaction
ENSG00000185686	Chromatin interaction
ENSG00000130720	Chromatin interaction
ENSG00000128266	Chromatin interaction
ENSG00000047315	Chromatin interaction

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs16997655	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56262723	1.00[AMR][1000 genomes]
rs58212972	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7288756	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs8141175	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:29 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1803110	chr22:22731758-23497674	Flanking Active TSS Bivalent Enhancer Strong transcription Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	136 gene(s)	inside rSNPs	diseases
2	nsv915235	chr22:22971768-23650987	Enhancers Flanking Active TSS Weak transcription Genic enhancers Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	101 gene(s)	inside rSNPs	diseases
3	esv3388845	chr22:22973346-23652447	Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	100 gene(s)	inside rSNPs	diseases
4	nsv531799	chr22:22993679-23642142	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
5	nsv1061433	chr22:22997799-23649107	Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
6	nsv521695	chr22:22998337-23648009	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
7	nsv915236	chr22:22998337-23650987	Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
8	nsv588512	chr22:22998337-23667731	Flanking Active TSS Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
9	nsv531800	chr22:23002708-23648163	Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
10	nsv916593	chr22:23002709-23648790	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
11	nsv993496	chr22:23002709-23654222	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
12	nsv1067002	chr22:23007167-23643363	Weak transcription Bivalent Enhancer Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
13	nsv1067324	chr22:23007367-23654223	Active TSS Bivalent Enhancer Bivalent/Poised TSS Enhancers Flanking Active TSS Weak transcription Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
14	nsv533839	chr22:23012013-23643223	Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
15	nsv916933	chr22:23012069-23654237	Weak transcription Enhancers ZNF genes & repeats Strong transcription Bivalent/Poised TSS Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
16	nsv531801	chr22:23028586-23657804	Enhancers Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	92 gene(s)	inside rSNPs	diseases
17	nsv531802	chr22:23046186-23627391	Enhancers Weak transcription Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	85 gene(s)	inside rSNPs	diseases
18	nsv1060509	chr22:23055148-23648719	Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	83 gene(s)	inside rSNPs	diseases
19	nsv1056324	chr22:23055148-23750989	Active TSS Weak transcription Genic enhancers Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	88 gene(s)	inside rSNPs	diseases
20	nsv1062780	chr22:23060449-23648719	Enhancers Strong transcription Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	82 gene(s)	inside rSNPs	diseases
21	nsv948942	chr22:23063178-23645718	Enhancers Weak transcription Active TSS Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	82 gene(s)	inside rSNPs	diseases
22	nsv1063200	chr22:23097177-23643224	Strong transcription Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	80 gene(s)	inside rSNPs	diseases
23	nsv949250	chr22:23157485-23645718	Enhancers Flanking Active TSS Weak transcription Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	69 gene(s)	inside rSNPs	diseases
24	esv34158	chr22:23216762-23499513	Weak transcription Bivalent Enhancer Enhancers Strong transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	53 gene(s)	inside rSNPs	diseases
25	nsv1057659	chr22:23400739-24138788	Enhancers Weak transcription Genic enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	85 gene(s)	inside rSNPs	diseases
26	nsv544616	chr22:23474827-23495231	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
27	esv1808801	chr22:23478573-23489042	Enhancers Flanking Active TSS Active TSS Strong transcription Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	11 gene(s)	inside rSNPs	diseases
28	esv1812488	chr22:23478573-23489042	Flanking Active TSS Bivalent Enhancer Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region	11 gene(s)	inside rSNPs	diseases
29	esv1801510	chr22:23478611-23491000	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:23484200-23487600	Weak transcription	Left Ventricle	heart
2	chr22:23484400-23487600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr22:23484600-23487600	Weak transcription	Placenta Amnion	Placenta Amnion
4	chr22:23484600-23487600	Weak transcription	Psoas Muscle	Psoas
5	chr22:23485000-23487600	Weak transcription	Fetal Brain Male	brain
6	chr22:23485000-23487600	Weak transcription	Lung	lung
7	chr22:23485200-23487600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr22:23485200-23487600	Weak transcription	Pancreas	Pancrea
9	chr22:23485400-23487600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr22:23486200-23487600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr22:23486400-23487600	Enhancers	Fetal Thymus	thymus
12	chr22:23486400-23487600	Enhancers	Stomach Mucosa	stomach
13	chr22:23486400-23487800	Enhancers	Sigmoid Colon	Sigmoid Colon
14	chr22:23486400-23487800	Enhancers	Small Intestine	intestine
15	chr22:23486400-23488000	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
16	chr22:23486800-23487600	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
17	chr22:23486800-23487600	Enhancers	Placenta	Placenta
18	chr22:23486800-23487800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
19	chr22:23486800-23487800	Active TSS	Stomach Smooth Muscle	stomach
20	chr22:23486800-23488000	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
21	chr22:23486800-23488000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
22	chr22:23486800-23488200	Flanking Active TSS	Primary T cells fromperipheralblood	blood
23	chr22:23486800-23489000	Active TSS	Pancreatic Islets	Pancreatic Islet
24	chr22:23487000-23487600	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
25	chr22:23487000-23487800	Active TSS	ES-WA7 Cell Line	embryonic stem cell
26	chr22:23487000-23487800	Enhancers	Primary hematopoietic stem cells short term culture	blood
27	chr22:23487000-23487800	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
28	chr22:23487000-23487800	Active TSS	NHLF	lung
29	chr22:23487000-23488000	Active TSS	ES-I3 Cell Line	embryonic stem cell
30	chr22:23487000-23488000	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
31	chr22:23487000-23488000	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
32	chr22:23487000-23488000	Flanking Active TSS	Primary B cells from peripheral blood	blood
33	chr22:23487000-23488000	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
34	chr22:23487000-23488000	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
35	chr22:23487000-23488000	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
36	chr22:23487000-23488000	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
37	chr22:23487000-23488000	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
38	chr22:23487000-23488000	Enhancers	Fetal Heart	heart
39	chr22:23487000-23488000	Active TSS	Ovary	ovary
40	chr22:23487000-23488200	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
41	chr22:23487000-23488200	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
42	chr22:23487000-23488200	Flanking Active TSS	Muscle Satellite Cultured Cells	--
43	chr22:23487000-23488200	Active TSS	Fetal Brain Female	brain
44	chr22:23487000-23488200	Flanking Active TSS	GM12878-XiMat	blood
45	chr22:23487000-23488200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
46	chr22:23487000-23488400	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
47	chr22:23487000-23488400	Active TSS	Duodenum Smooth Muscle	Duodenum
48	chr22:23487000-23488400	Flanking Bivalent TSS/Enh	Skeletal Muscle Male	skeletal muscle
49	chr22:23487200-23487600	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
50	chr22:23487200-23487600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links