Variant report
| Variant | rs583889 |
|---|---|
| Chromosome Location | chr3:105261753-105261754 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:105221400-105300400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 2 | chr3:105223800-105274800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 3 | chr3:105230200-105262600 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 4 | chr3:105232200-105274000 | Weak transcription | HSMMtube | muscle |
| 5 | chr3:105234600-105274600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 6 | chr3:105237800-105274600 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 7 | chr3:105237800-105275800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 8 | chr3:105242000-105293600 | Weak transcription | Lung | lung |
| 9 | chr3:105242400-105280400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 10 | chr3:105242800-105266800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 11 | chr3:105244800-105275800 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 12 | chr3:105245800-105268000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 13 | chr3:105246600-105284400 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 14 | chr3:105248000-105281200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 15 | chr3:105248200-105262800 | Weak transcription | NHLF | lung |
| 16 | chr3:105248400-105291200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 17 | chr3:105249400-105278600 | Weak transcription | Small Intestine | intestine |
| 18 | chr3:105249800-105263400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 19 | chr3:105249800-105284000 | Weak transcription | Fetal Stomach | stomach |
| 20 | chr3:105249800-105285200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 21 | chr3:105250600-105262600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 22 | chr3:105250600-105270400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 23 | chr3:105251200-105266400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 24 | chr3:105251800-105274400 | Weak transcription | Dnd41 | blood |
| 25 | chr3:105252600-105263400 | Weak transcription | Left Ventricle | heart |
| 26 | chr3:105253200-105273000 | Weak transcription | Gastric | stomach |
| 27 | chr3:105253800-105270000 | Weak transcription | Fetal Intestine Large | intestine |
| 28 | chr3:105254000-105273000 | Weak transcription | Fetal Lung | lung |
| 29 | chr3:105254800-105279800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 30 | chr3:105256200-105268200 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 31 | chr3:105257200-105269400 | Weak transcription | Fetal Heart | heart |
| 32 | chr3:105257400-105272400 | Weak transcription | NHDF-Ad | bronchial |
| 33 | chr3:105257800-105271400 | Weak transcription | Stomach Mucosa | stomach |
| 34 | chr3:105258000-105270200 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 35 | chr3:105258000-105274600 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 36 | chr3:105258200-105263800 | Strong transcription | HMEC | breast |
| 37 | chr3:105258200-105268400 | Strong transcription | GM12878-XiMat | blood |
| 38 | chr3:105258600-105273600 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 39 | chr3:105258800-105264800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 40 | chr3:105258800-105266600 | Strong transcription | Primary B cells from peripheral blood | blood |
| 41 | chr3:105258800-105267000 | Strong transcription | Primary B cells from cord blood | blood |
| 42 | chr3:105258800-105271800 | Strong transcription | HUVEC | blood vessel |
| 43 | chr3:105258800-105274400 | Strong transcription | Liver | Liver |
| 44 | chr3:105258800-105274400 | Strong transcription | NH-A | brain |
| 45 | chr3:105259000-105264000 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 46 | chr3:105259000-105264400 | Strong transcription | Primary hematopoietic stem cells | blood |
| 47 | chr3:105259000-105271200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 48 | chr3:105259000-105273400 | Strong transcription | Osteobl | bone |
| 49 | chr3:105259200-105262000 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 50 | chr3:105259200-105263800 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
