Variant report

Variant	rs58470973
Chromosome Location	chr12:104316667-104316668
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs2374286	1.00[AMR][1000 genomes]
rs4135041	0.82[AFR][1000 genomes]
rs4135051	0.82[AFR][1000 genomes]
rs61394964	1.00[AMR][1000 genomes]
rs73386107	1.00[AMR][1000 genomes]
rs73386110	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73386111	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73386115	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73386118	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73386186	1.00[AMR][1000 genomes]
rs73390454	0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv560039	chr12:104177668-104455340	Strong transcription Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	63 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:104306200-104320800	Weak transcription	Psoas Muscle	Psoas

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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