Variant report

Variant	rs585204
Chromosome Location	chrX:65263794-65263795
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs585069	1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3429625	chrX:64787230-65458721	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
2	nsv995042	chrX:65121634-65953299	Weak transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	40 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:65256400-65265400	Weak transcription	K562	blood
2	chrX:65260200-65266400	Weak transcription	Primary neutrophils fromperipheralblood	blood
3	chrX:65260400-65265200	Weak transcription	Primary monocytes fromperipheralblood	blood
4	chrX:65261400-65265400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
5	chrX:65262400-65264200	Enhancers	Fetal Intestine Large	intestine
6	chrX:65263000-65263800	Weak transcription	Fetal Intestine Small	intestine
7	chrX:65263000-65264000	Enhancers	Rectal Mucosa Donor 31	rectum
8	chrX:65263200-65265600	Weak transcription	GM12878-XiMat	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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