Variant report

Variant	rs58589144
Chromosome Location	chr4:30074510-30074511
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs11930356	0.86[ASN][1000 genomes]
rs12499826	0.88[ASN][1000 genomes]
rs12499830	0.90[ASN][1000 genomes]
rs4383582	0.90[ASN][1000 genomes]
rs4515128	0.90[ASN][1000 genomes]
rs4547761	0.88[ASN][1000 genomes]
rs4692086	0.90[ASN][1000 genomes]
rs4692436	0.90[ASN][1000 genomes]
rs4692437	0.90[ASN][1000 genomes]
rs4692438	0.90[ASN][1000 genomes]
rs56392617	0.90[ASN][1000 genomes]
rs57040896	0.90[ASN][1000 genomes]
rs57282460	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs57714252	0.82[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs57823715	0.90[ASN][1000 genomes]
rs57939446	0.90[ASN][1000 genomes]
rs58489717	0.90[ASN][1000 genomes]
rs59554204	0.90[ASN][1000 genomes]
rs59690473	0.90[ASN][1000 genomes]
rs60419278	0.90[ASN][1000 genomes]
rs60731073	0.90[ASN][1000 genomes]
rs61026851	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs61358830	0.82[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs66564361	0.90[ASN][1000 genomes]
rs66772936	0.90[ASN][1000 genomes]
rs66814122	0.90[ASN][1000 genomes]
rs66867855	0.80[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs66902430	0.90[ASN][1000 genomes]
rs67012809	0.90[ASN][1000 genomes]
rs67029788	0.90[ASN][1000 genomes]
rs67041305	0.90[ASN][1000 genomes]
rs67487314	0.90[ASN][1000 genomes]
rs67514230	0.90[ASN][1000 genomes]
rs67745211	0.90[ASN][1000 genomes]
rs67888994	0.90[ASN][1000 genomes]
rs6851743	0.90[ASN][1000 genomes]
rs73217420	0.90[ASN][1000 genomes]
rs73217421	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7658741	0.90[ASN][1000 genomes]
rs7675100	0.90[ASN][1000 genomes]
rs7700066	0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv878802	chr4:29972531-30156463	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:30074200-30074800	Enhancers	Fetal Lung	lung
2	chr4:30074400-30075200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr4:30074400-30075200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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