Variant report

Variant	rs58610730
Chromosome Location	chr7:105361076-105361077
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:105355420..105358270-chr7:105359220..105361581,2	MCF-7	breast:
2	chr7:105354511..105357215-chr7:105359337..105361077,2	K562	blood:

rs_ID	r²[population]
rs58590006	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58741903	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61461925	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73717269	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]

Chromatin state (count:70 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:105349000-105374800	Weak transcription	Colon Smooth Muscle	Colon
2	chr7:105352400-105362600	Weak transcription	Stomach Mucosa	stomach
3	chr7:105352600-105388600	Weak transcription	Aorta	Aorta
4	chr7:105352800-105361800	Weak transcription	Brain Hippocampus Middle	brain
5	chr7:105352800-105364000	Weak transcription	Lung	lung
6	chr7:105352800-105364000	Weak transcription	Rectal Mucosa Donor 31	rectum
7	chr7:105352800-105383000	Weak transcription	Duodenum Smooth Muscle	Duodenum
8	chr7:105352800-105383800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr7:105352800-105392400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
10	chr7:105353000-105361800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
11	chr7:105353400-105374000	Weak transcription	Primary T cells fromperipheralblood	blood
12	chr7:105353800-105373000	Weak transcription	Esophagus	oesophagus
13	chr7:105354000-105361800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
14	chr7:105354000-105374800	Weak transcription	Spleen	Spleen
15	chr7:105354400-105362000	Weak transcription	Cortex derived primary cultured neurospheres	brain
16	chr7:105354400-105382400	Weak transcription	Primary T cells from cord blood	blood
17	chr7:105354400-105390000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
18	chr7:105354400-105399800	Weak transcription	Ovary	ovary
19	chr7:105354600-105392000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
20	chr7:105354800-105364000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
21	chr7:105354800-105368200	Weak transcription	Hela-S3	cervix
22	chr7:105354800-105387600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
23	chr7:105355000-105363600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
24	chr7:105355000-105368400	Weak transcription	Muscle Satellite Cultured Cells	--
25	chr7:105355000-105401000	Weak transcription	NHEK	skin
26	chr7:105355400-105364400	Weak transcription	Rectal Mucosa Donor 29	rectum
27	chr7:105355800-105381800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr7:105356600-105366800	Weak transcription	Sigmoid Colon	Sigmoid Colon
29	chr7:105357200-105379200	Weak transcription	Thymus	Thymus
30	chr7:105358000-105364000	Weak transcription	Brain Germinal Matrix	brain
31	chr7:105358600-105361200	Enhancers	Skeletal Muscle Male	skeletal muscle
32	chr7:105358600-105361800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
33	chr7:105358600-105362000	Strong transcription	Fetal Intestine Small	intestine
34	chr7:105358600-105362800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
35	chr7:105358800-105361200	Enhancers	H1 Cell Line	embryonic stem cell
36	chr7:105359000-105361800	Weak transcription	Brain Angular Gyrus	brain
37	chr7:105359200-105364000	Weak transcription	Fetal Brain Female	brain
38	chr7:105359400-105374800	Weak transcription	Stomach Smooth Muscle	stomach
39	chr7:105359600-105362000	Weak transcription	Brain Anterior Caudate	brain
40	chr7:105359600-105366800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
41	chr7:105359600-105368800	Weak transcription	Liver	Liver
42	chr7:105359800-105363000	Weak transcription	Right Atrium	heart
43	chr7:105359800-105363600	Weak transcription	Right Ventricle	heart
44	chr7:105359800-105369000	Weak transcription	Adipose Nuclei	Adipose
45	chr7:105359800-105406200	Weak transcription	Gastric	stomach
46	chr7:105359800-105438600	Weak transcription	Pancreas	Pancrea
47	chr7:105360000-105391400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
48	chr7:105360200-105363400	Weak transcription	Fetal Stomach	stomach
49	chr7:105360200-105364000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
50	chr7:105360200-105368800	Weak transcription	Primary monocytes fromperipheralblood	blood

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