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Variant report
Variant
rs58628367
Chromosome Location
chr14:85850618-85850619
allele
A/T
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:1)
CpG islands (count:0)
Chromatin interactive region (count:0)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
(count:1 , 50 per page) page:
1
No.
Transcrition factor
Chromosome Location
Cell Line
Cell type
Cell Stage
Matched TF binding sites
1
MAFK
chr14:85850581-85850877
HepG2
liver:
n/a
chr14:85850737-85850752
No data
No data
No data
No data
No data
Variant related genes
Relation type
ENSG00000258814
TF binding region
Extended variants information (count: 6 )
Associated traits (count: 0)
rSNPs within LD-proxies of this variant (count:4)
rs_ID
r
2
[population]
rs11845784
1.00[AMR][1000 genomes]
rs17120966
1.00[AMR][1000 genomes]
rs61594569
1.00[AMR][1000 genomes]
rs7146733
0.83[AFR][1000 genomes]
Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page:
1
No.
Variant name
Chromosome position
Chromatin state
Related regulatory elements
Target genes
Extended variants
Associated traits
1
nsv1047924
chr14:85826280-85868228
Enhancers Weak transcription Active TSS Flanking Active TSS
TF binding regionlncRNA
2 gene(s)
inside rSNPs
diseases
2
nsv1035826
chr14:85850141-85898732
Flanking Active TSS Enhancers Weak transcription Active TSS
TF binding regionChromatin interactive regionlncRNA
5 gene(s)
inside rSNPs
diseases
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links