The 2.0 version of rSNPBase

Variant report

Variant rs58637973
Chromosome Location chr16:48614079-48614080
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:48583800-48617800 Weak transcription H9 Cell Line embryonic stem cell
2 chr16:48591400-48617200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr16:48594000-48617800 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr16:48595200-48624000 Weak transcription H1 Cell Line embryonic stem cell
5 chr16:48596000-48624400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr16:48596200-48615200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr16:48596400-48615000 Weak transcription HUES48 Cell Line embryonic stem cell
8 chr16:48596400-48617200 Weak transcription NH-A brain
9 chr16:48596800-48624400 Weak transcription iPS-20b Cell Line embryonic stem cell
10 chr16:48603000-48614200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr16:48605000-48630200 Weak transcription Spleen Spleen
12 chr16:48609800-48624200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr16:48609800-48624200 Weak transcription Fetal Thymus thymus
14 chr16:48609800-48624400 Weak transcription Thymus Thymus
15 chr16:48610000-48617800 Weak transcription Fetal Heart heart
16 chr16:48610400-48617200 Weak transcription Stomach Smooth Muscle stomach
17 chr16:48611000-48624400 Weak transcription Psoas Muscle Psoas
18 chr16:48611000-48624400 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr16:48611400-48617200 Weak transcription Muscle Satellite Cultured Cells --
20 chr16:48611400-48617800 Weak transcription Brain Cingulate Gyrus brain
21 chr16:48611600-48614800 Weak transcription HepG2 liver
22 chr16:48611600-48617200 Weak transcription Osteobl bone
23 chr16:48611800-48614200 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr16:48611800-48626000 Weak transcription Aorta Aorta
25 chr16:48612000-48619200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
26 chr16:48612200-48616600 Weak transcription Left Ventricle heart
27 chr16:48612200-48616600 Weak transcription Lung lung
28 chr16:48612200-48624200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr16:48612400-48614400 Weak transcription Monocytes-CD14+_RO01746 blood
30 chr16:48612400-48616600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr16:48612400-48617200 Weak transcription Right Atrium heart
32 chr16:48612400-48621000 Weak transcription Ovary ovary
33 chr16:48612400-48624400 Weak transcription Esophagus oesophagus
34 chr16:48612400-48630200 Weak transcription Gastric stomach
35 chr16:48612600-48616200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr16:48612800-48618400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr16:48613000-48616200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr16:48613000-48620000 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr16:48613200-48614200 Weak transcription HMEC breast
40 chr16:48613200-48616000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr16:48613200-48617800 Weak transcription Right Ventricle heart
42 chr16:48613200-48621000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr16:48613600-48614400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr16:48614000-48614200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr16:48614000-48614200 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr16:48614000-48614400 Weak transcription Primary T helper naive cells from peripheral blood blood

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Last update: Aug 31, 2015