Variant report

Variant	rs58655350
Chromosome Location	chr1:165372175-165372176
allele	-/CT
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3400219	chr1:165369828-165374126	Enhancers Weak transcription Bivalent/Poised TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	n/a
2	esv3387970	chr1:165371879-165372454	ZNF genes & repeats Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
3	esv2213105	chr1:165372175-165372177	ZNF genes & repeats Genic enhancers Weak transcription Enhancers Strong transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165362600-165378200	Weak transcription	Psoas Muscle	Psoas
2	chr1:165362800-165392200	Weak transcription	Brain Anterior Caudate	brain
3	chr1:165363600-165378400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr1:165367800-165378600	Weak transcription	Fetal Lung	lung
5	chr1:165368400-165372600	Weak transcription	Spleen	Spleen
6	chr1:165368400-165376400	Weak transcription	Skeletal Muscle Male	skeletal muscle
7	chr1:165370400-165380800	Strong transcription	Fetal Muscle Trunk	muscle
8	chr1:165370600-165373400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr1:165370800-165373000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
10	chr1:165370800-165373200	Weak transcription	Stomach Mucosa	stomach
11	chr1:165371800-165372200	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr1:165371800-165372200	ZNF genes & repeats	Lung	lung
13	chr1:165371800-165372200	Genic enhancers	Skeletal Muscle Female	skeletal muscle
14	chr1:165372000-165372200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr1:165372000-165373400	Weak transcription	Fetal Muscle Leg	muscle

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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