The 2.0 version of rSNPBase

Variant report

Variant rs58667875
Chromosome Location chr15:59020780-59020781
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:58977200-59039200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr15:58990000-59023400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr15:58992000-59023000 Weak transcription Esophagus oesophagus
4 chr15:58992000-59023800 Weak transcription Aorta Aorta
5 chr15:58992600-59021000 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr15:58999000-59023800 Weak transcription Gastric stomach
7 chr15:59005200-59022400 Weak transcription Fetal Muscle Leg muscle
8 chr15:59005600-59021600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr15:59005600-59023000 Weak transcription Spleen Spleen
10 chr15:59005600-59023600 Weak transcription NHEK skin
11 chr15:59005800-59022800 Weak transcription HMEC breast
12 chr15:59005800-59025200 Weak transcription H1 Cell Line embryonic stem cell
13 chr15:59006200-59023800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr15:59006200-59024000 Weak transcription Pancreas Pancrea
15 chr15:59006400-59021600 Weak transcription Fetal Stomach stomach
16 chr15:59006400-59022800 Weak transcription Fetal Intestine Small intestine
17 chr15:59007400-59026400 Weak transcription Fetal Intestine Large intestine
18 chr15:59008600-59028400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr15:59009600-59029600 Weak transcription Primary neutrophils fromperipheralblood blood
20 chr15:59009800-59021000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr15:59009800-59035400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr15:59010000-59021800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr15:59010200-59024000 Weak transcription HUES64 Cell Line embryonic stem cell
24 chr15:59010200-59024200 Weak transcription HepG2 liver
25 chr15:59010800-59031200 Weak transcription Dnd41 blood
26 chr15:59011200-59022400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr15:59011200-59023800 Weak transcription Hela-S3 cervix
28 chr15:59013200-59030200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr15:59013400-59022400 Weak transcription Brain Inferior Temporal Lobe brain
30 chr15:59013400-59024000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
31 chr15:59013400-59029800 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr15:59015000-59024200 Weak transcription Fetal Adrenal Gland Adrenal Gland
33 chr15:59016800-59025000 Weak transcription Pancreatic Islets Pancreatic Islet
34 chr15:59016800-59034200 Weak transcription Brain Germinal Matrix brain
35 chr15:59017000-59022400 Weak transcription Brain Substantia Nigra brain
36 chr15:59017000-59022800 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr15:59017000-59023800 Weak transcription Fetal Heart heart
38 chr15:59017000-59024000 Weak transcription Duodenum Mucosa Duodenum
39 chr15:59017200-59021000 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr15:59017200-59021200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr15:59017200-59021200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr15:59017200-59021200 Weak transcription Fetal Lung lung
43 chr15:59017200-59021600 Weak transcription Brain Cingulate Gyrus brain
44 chr15:59017200-59021800 Weak transcription Thymus Thymus
45 chr15:59017200-59022000 Weak transcription Fetal Muscle Trunk muscle
46 chr15:59017200-59022200 Weak transcription Colon Smooth Muscle Colon
47 chr15:59017200-59022200 Weak transcription HSMMtube muscle
48 chr15:59017200-59022400 Weak transcription Brain Hippocampus Middle brain
49 chr15:59017200-59023000 Weak transcription Duodenum Smooth Muscle Duodenum
50 chr15:59017200-59023400 Weak transcription Brain Anterior Caudate brain

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Last update: Aug 31, 2015