The 2.0 version of rSNPBase

Variant report

Variant rs587171
Chromosome Location chr9:79109158-79109159
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:79075600-79117800 Weak transcription Primary T cells from cord blood blood
2 chr9:79080800-79117200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr9:79081800-79117200 Weak transcription Gastric stomach
4 chr9:79082600-79117600 Weak transcription NHLF lung
5 chr9:79087600-79117400 Weak transcription Colonic Mucosa Colon
6 chr9:79089000-79116400 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr9:79093400-79142800 Weak transcription Fetal Stomach stomach
8 chr9:79093600-79111400 Weak transcription NHDF-Ad bronchial
9 chr9:79093600-79117200 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr9:79093800-79116600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr9:79093800-79117000 Weak transcription HMEC breast
12 chr9:79093800-79118000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr9:79094200-79120200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr9:79097200-79117200 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr9:79101200-79116400 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr9:79102200-79111400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr9:79103800-79117200 Weak transcription Lung lung
18 chr9:79103800-79117800 Weak transcription Thymus Thymus
19 chr9:79104200-79110400 Weak transcription HSMM muscle
20 chr9:79104200-79117400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
21 chr9:79104400-79117400 Weak transcription Small Intestine intestine
22 chr9:79104600-79117600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr9:79105800-79117200 Weak transcription Primary T cells fromperipheralblood blood
24 chr9:79106200-79117200 Weak transcription HUVEC blood vessel
25 chr9:79106600-79109200 Weak transcription Monocytes-CD14+_RO01746 blood
26 chr9:79106600-79110000 Weak transcription Primary B cells from peripheral blood blood
27 chr9:79106600-79115000 Weak transcription Stomach Mucosa stomach
28 chr9:79106800-79109600 Weak transcription Primary monocytes fromperipheralblood blood
29 chr9:79106800-79109800 Weak transcription Primary hematopoietic stem cells blood
30 chr9:79107000-79109200 Strong transcription Muscle Satellite Cultured Cells --
31 chr9:79107000-79109800 Strong transcription Primary hematopoietic stem cells short term culture blood
32 chr9:79107000-79116600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr9:79107400-79109600 Strong transcription Fetal Intestine Small intestine
34 chr9:79107600-79109400 Enhancers H1 Cell Line embryonic stem cell
35 chr9:79107600-79110200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr9:79107600-79116400 Weak transcription Primary neutrophils fromperipheralblood blood
37 chr9:79108000-79109200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr9:79108000-79109200 Enhancers HUES6 Cell Line embryonic stem cell
39 chr9:79108000-79109400 Enhancers HUES48 Cell Line embryonic stem cell
40 chr9:79108000-79117200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
41 chr9:79108200-79117800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr9:79108400-79110600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr9:79108400-79114400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr9:79108800-79109400 Enhancers iPS-15b Cell Line embryonic stem cell
45 chr9:79108800-79109400 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
46 chr9:79108800-79109400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr9:79108800-79110400 Strong transcription Primary B cells from cord blood blood
48 chr9:79108800-79111400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr9:79108800-79111600 Strong transcription Fetal Intestine Large intestine
50 chr9:79108800-79117200 Weak transcription HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015