The 2.0 version of rSNPBase

Variant report

Variant rs58755194
Chromosome Location chr1:226860784-226860785
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:226846200-226862400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
2 chr1:226851600-226863800 Weak transcription NHEK skin
3 chr1:226851800-226863800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr1:226851800-226864000 Weak transcription HMEC breast
5 chr1:226852200-226863600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr1:226852200-226864000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr1:226852800-226863000 Weak transcription Fetal Lung lung
8 chr1:226853000-226863000 Weak transcription Small Intestine intestine
9 chr1:226853000-226864800 Weak transcription Pancreas Pancrea
10 chr1:226853200-226862600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr1:226853200-226864600 Weak transcription Ovary ovary
12 chr1:226854000-226862600 Weak transcription NHLF lung
13 chr1:226854000-226864600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr1:226854800-226864800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr1:226855200-226864600 Weak transcription Placenta Amnion Placenta Amnion
16 chr1:226855800-226863400 Weak transcription Right Ventricle heart
17 chr1:226856200-226861600 Weak transcription Psoas Muscle Psoas
18 chr1:226856200-226861800 Weak transcription Fetal Muscle Trunk muscle
19 chr1:226856200-226862600 Weak transcription H1 Cell Line embryonic stem cell
20 chr1:226856200-226864600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr1:226856200-226864600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr1:226856200-226867400 Weak transcription Fetal Brain Female brain
23 chr1:226856200-226868400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr1:226856400-226862400 Weak transcription Fetal Heart heart
25 chr1:226856400-226862800 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr1:226856600-226862600 Weak transcription iPS-20b Cell Line embryonic stem cell
27 chr1:226856600-226863200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr1:226857000-226862400 Enhancers Primary T killer memory cells from peripheral blood blood
29 chr1:226857200-226861800 Genic enhancers Primary T helper cells fromperipheralblood blood
30 chr1:226857400-226862800 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr1:226857600-226862400 Enhancers Adipose Nuclei Adipose
32 chr1:226858200-226861400 Genic enhancers Primary T cells from cord blood blood
33 chr1:226858600-226861400 Genic enhancers Primary T cells effector/memory enriched fromperipheralblood blood
34 chr1:226858800-226860800 Genic enhancers Primary B cells from peripheral blood blood
35 chr1:226858800-226860800 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
36 chr1:226858800-226860800 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
37 chr1:226858800-226860800 Genic enhancers Brain Hippocampus Middle brain
38 chr1:226858800-226860800 Genic enhancers Spleen Spleen
39 chr1:226858800-226861400 Strong transcription Fetal Stomach stomach
40 chr1:226858800-226861600 Genic enhancers Fetal Thymus thymus
41 chr1:226858800-226861800 Genic enhancers Primary T cells fromperipheralblood blood
42 chr1:226858800-226861800 Genic enhancers Thymus Thymus
43 chr1:226858800-226862000 Enhancers Rectal Mucosa Donor 31 rectum
44 chr1:226859200-226862400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr1:226859400-226860800 Enhancers Right Atrium heart
46 chr1:226859400-226861600 Enhancers Primary neutrophils fromperipheralblood blood
47 chr1:226859400-226862600 Enhancers Skeletal Muscle Male skeletal muscle
48 chr1:226859600-226860800 Enhancers Fetal Intestine Small intestine
49 chr1:226859600-226861400 Weak transcription Rectal Smooth Muscle rectum
50 chr1:226859600-226862200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015