Variant report

Variant rs587622488
Chromosome Location chr1:144948748-144948749
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:144934000-144949000 Weak transcription Spleen Spleen
2 chr1:144936600-144948800 Weak transcription Pancreas Pancrea
3 chr1:144939200-144948800 Weak transcription Colonic Mucosa Colon
4 chr1:144939800-144952200 Strong transcription K562 blood
5 chr1:144941600-144950000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr1:144941600-144951000 Strong transcription Left Ventricle heart
7 chr1:144942200-144949600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr1:144942200-144960200 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr1:144942400-144949200 Strong transcription Fetal Muscle Trunk muscle
10 chr1:144942400-144951400 Strong transcription Brain Cingulate Gyrus brain
11 chr1:144942400-144952200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr1:144942600-144948800 Weak transcription Small Intestine intestine
13 chr1:144942600-144952000 Strong transcription Osteobl bone
14 chr1:144942600-144952200 Strong transcription Placenta Placenta
15 chr1:144942800-144951800 Strong transcription HSMM muscle
16 chr1:144942800-144952200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr1:144942800-144952200 Strong transcription Muscle Satellite Cultured Cells --
18 chr1:144942800-144952200 Strong transcription HSMMtube muscle
19 chr1:144943000-144949000 Strong transcription Brain Inferior Temporal Lobe brain
20 chr1:144943200-144953000 Weak transcription Fetal Brain Female brain
21 chr1:144943400-144949200 Strong transcription Fetal Muscle Leg muscle
22 chr1:144943400-144961000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
23 chr1:144944000-144948800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr1:144944000-144950000 Weak transcription Fetal Stomach stomach
25 chr1:144944000-144950000 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr1:144944000-144950600 Weak transcription Lung lung
27 chr1:144944000-144966200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr1:144944200-144950000 Weak transcription NHLF lung
29 chr1:144944800-144949000 Strong transcription Brain Hippocampus Middle brain
30 chr1:144944800-144949200 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr1:144945000-144949200 Strong transcription Brain Anterior Caudate brain
32 chr1:144945000-144949200 Strong transcription Brain Substantia Nigra brain
33 chr1:144945200-144949000 Strong transcription NHDF-Ad bronchial
34 chr1:144945200-144949400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr1:144945400-144949200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr1:144945600-144950200 Strong transcription Psoas Muscle Psoas
37 chr1:144945800-144949000 Strong transcription Brain Angular Gyrus brain
38 chr1:144945800-144952200 Strong transcription Adipose Nuclei Adipose
39 chr1:144946000-144948800 Enhancers Primary hematopoietic stem cells short term culture blood
40 chr1:144946000-144949200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr1:144946200-144949600 Weak transcription Fetal Kidney kidney
42 chr1:144946600-144964800 Weak transcription HMEC breast
43 chr1:144946800-144949200 Weak transcription Pancreatic Islets Pancreatic Islet
44 chr1:144946800-144950400 Weak transcription Breast Myoepithelial Primary Cells Breast
45 chr1:144946800-144950800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr1:144946800-144962800 Weak transcription Liver Liver
47 chr1:144946800-144966200 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr1:144947200-144948800 Weak transcription Brain Germinal Matrix brain
49 chr1:144947400-144952400 Strong transcription Skeletal Muscle Male skeletal muscle
50 chr1:144947400-144956400 Weak transcription Stomach Smooth Muscle stomach

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