Variant report

Variant rs587637810
Chromosome Location chr1:144942551-144942552
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:144933200-144943800 Weak transcription Lung lung
2 chr1:144934000-144949000 Weak transcription Spleen Spleen
3 chr1:144934400-144942600 Weak transcription Right Ventricle heart
4 chr1:144935400-144944000 Genic enhancers Skeletal Muscle Male skeletal muscle
5 chr1:144935400-144944000 Genic enhancers Skeletal Muscle Female skeletal muscle
6 chr1:144936600-144948800 Weak transcription Pancreas Pancrea
7 chr1:144937000-144943800 Weak transcription Esophagus oesophagus
8 chr1:144937200-144943800 Weak transcription Gastric stomach
9 chr1:144937400-144948200 Weak transcription Primary B cells from cord blood blood
10 chr1:144937800-144948400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
11 chr1:144938600-144943600 Weak transcription Primary neutrophils fromperipheralblood blood
12 chr1:144939200-144948800 Weak transcription Colonic Mucosa Colon
13 chr1:144939400-144943200 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr1:144939400-144943200 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr1:144939400-144943200 Weak transcription HepG2 liver
16 chr1:144939800-144944000 Enhancers Fetal Stomach stomach
17 chr1:144939800-144952200 Strong transcription K562 blood
18 chr1:144940000-144942600 Enhancers Fetal Adrenal Gland Adrenal Gland
19 chr1:144940000-144943200 Enhancers Cortex derived primary cultured neurospheres brain
20 chr1:144940200-144942800 Enhancers iPS-15b Cell Line embryonic stem cell
21 chr1:144940200-144942800 Enhancers Placenta Amnion Placenta Amnion
22 chr1:144940200-144943200 Enhancers iPS-18 Cell Line embryonic stem cell
23 chr1:144940400-144942600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr1:144940400-144943000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
25 chr1:144940400-144944000 Enhancers Colon Smooth Muscle Colon
26 chr1:144940600-144943400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr1:144940600-144943400 Genic enhancers Fetal Muscle Leg muscle
28 chr1:144940600-144944000 Enhancers Rectal Smooth Muscle rectum
29 chr1:144940800-144942600 Enhancers Primary T cells from cord blood blood
30 chr1:144940800-144942600 Enhancers Primary T helper naive cells fromperipheralblood blood
31 chr1:144940800-144942600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
32 chr1:144940800-144944000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr1:144941000-144942600 Genic enhancers Placenta Placenta
34 chr1:144941000-144946200 Weak transcription Fetal Intestine Large intestine
35 chr1:144941200-144942800 Genic enhancers Fetal Heart heart
36 chr1:144941200-144943000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr1:144941200-144943800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr1:144941200-144946400 Weak transcription Fetal Intestine Small intestine
39 chr1:144941400-144942800 Genic enhancers Brain Anterior Caudate brain
40 chr1:144941400-144943200 Enhancers Fetal Brain Female brain
41 chr1:144941400-144943400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr1:144941400-144946800 Weak transcription Stomach Mucosa stomach
43 chr1:144941600-144942600 Enhancers HUES6 Cell Line embryonic stem cell
44 chr1:144941600-144942600 Enhancers Fetal Kidney kidney
45 chr1:144941600-144943200 Enhancers HUES48 Cell Line embryonic stem cell
46 chr1:144941600-144943200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
47 chr1:144941600-144943600 Enhancers Pancreatic Islets Pancreatic Islet
48 chr1:144941600-144943800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr1:144941600-144944000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
50 chr1:144941600-144945800 Weak transcription Breast Myoepithelial Primary Cells Breast

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