Variant report

Variant rs587639453
Chromosome Location chr1:144943034-144943035
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:144933200-144943800 Weak transcription Lung lung
2 chr1:144934000-144949000 Weak transcription Spleen Spleen
3 chr1:144935400-144944000 Genic enhancers Skeletal Muscle Male skeletal muscle
4 chr1:144935400-144944000 Genic enhancers Skeletal Muscle Female skeletal muscle
5 chr1:144936600-144948800 Weak transcription Pancreas Pancrea
6 chr1:144937000-144943800 Weak transcription Esophagus oesophagus
7 chr1:144937200-144943800 Weak transcription Gastric stomach
8 chr1:144937400-144948200 Weak transcription Primary B cells from cord blood blood
9 chr1:144937800-144948400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr1:144938600-144943600 Weak transcription Primary neutrophils fromperipheralblood blood
11 chr1:144939200-144948800 Weak transcription Colonic Mucosa Colon
12 chr1:144939400-144943200 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr1:144939400-144943200 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr1:144939400-144943200 Weak transcription HepG2 liver
15 chr1:144939800-144944000 Enhancers Fetal Stomach stomach
16 chr1:144939800-144952200 Strong transcription K562 blood
17 chr1:144940000-144943200 Enhancers Cortex derived primary cultured neurospheres brain
18 chr1:144940200-144943200 Enhancers iPS-18 Cell Line embryonic stem cell
19 chr1:144940400-144944000 Enhancers Colon Smooth Muscle Colon
20 chr1:144940600-144943400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr1:144940600-144943400 Genic enhancers Fetal Muscle Leg muscle
22 chr1:144940600-144944000 Enhancers Rectal Smooth Muscle rectum
23 chr1:144940800-144944000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr1:144941000-144946200 Weak transcription Fetal Intestine Large intestine
25 chr1:144941200-144943800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr1:144941200-144946400 Weak transcription Fetal Intestine Small intestine
27 chr1:144941400-144943200 Enhancers Fetal Brain Female brain
28 chr1:144941400-144943400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr1:144941400-144946800 Weak transcription Stomach Mucosa stomach
30 chr1:144941600-144943200 Enhancers HUES48 Cell Line embryonic stem cell
31 chr1:144941600-144943200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
32 chr1:144941600-144943600 Enhancers Pancreatic Islets Pancreatic Islet
33 chr1:144941600-144943800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr1:144941600-144944000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
35 chr1:144941600-144945800 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr1:144941600-144946800 Strong transcription Liver Liver
37 chr1:144941600-144946800 Weak transcription Ovary ovary
38 chr1:144941600-144950000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr1:144941600-144951000 Strong transcription Left Ventricle heart
40 chr1:144941800-144943400 Strong transcription Adipose Nuclei Adipose
41 chr1:144941800-144944000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
42 chr1:144941800-144944200 Strong transcription Brain Germinal Matrix brain
43 chr1:144942000-144944000 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
44 chr1:144942000-144944400 Strong transcription Brain Hippocampus Middle brain
45 chr1:144942000-144945200 Genic enhancers NHDF-Ad bronchial
46 chr1:144942200-144944000 Strong transcription Brain Substantia Nigra brain
47 chr1:144942200-144946000 Weak transcription HMEC breast
48 chr1:144942200-144949600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr1:144942200-144960200 Weak transcription ES-I3 Cell Line embryonic stem cell
50 chr1:144942400-144943400 Genic enhancers Aorta Aorta

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