The 2.0 version of rSNPBase

Variant report

Variant rs587643522
Chromosome Location chr1:144607239-144607240
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:144594600-144621200 Weak transcription Gastric stomach
2 chr1:144594600-144622000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr1:144594600-144622000 Weak transcription Placenta Placenta
4 chr1:144594800-144607600 Weak transcription Brain Substantia Nigra brain
5 chr1:144594800-144608000 Weak transcription Brain Inferior Temporal Lobe brain
6 chr1:144594800-144608000 Weak transcription Fetal Brain Male brain
7 chr1:144594800-144608600 Weak transcription Psoas Muscle Psoas
8 chr1:144594800-144609000 Weak transcription A549 lung
9 chr1:144594800-144609000 Weak transcription GM12878-XiMat blood
10 chr1:144594800-144609200 Weak transcription Brain Hippocampus Middle brain
11 chr1:144594800-144618000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr1:144594800-144618000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr1:144594800-144618000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
14 chr1:144594800-144618000 Weak transcription Adipose Nuclei Adipose
15 chr1:144594800-144619400 Weak transcription Aorta Aorta
16 chr1:144594800-144620000 Weak transcription Rectal Smooth Muscle rectum
17 chr1:144594800-144620200 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr1:144594800-144620600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr1:144594800-144621200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr1:144594800-144621200 Weak transcription Fetal Lung lung
21 chr1:144594800-144621200 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr1:144594800-144621400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr1:144594800-144621400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr1:144594800-144621600 Weak transcription HSMM muscle
25 chr1:144594800-144621800 Weak transcription Brain Germinal Matrix brain
26 chr1:144594800-144621800 Weak transcription HSMMtube muscle
27 chr1:144594800-144622000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr1:144594800-144622000 Weak transcription Duodenum Mucosa Duodenum
29 chr1:144594800-144623400 Weak transcription Primary T cells from cord blood blood
30 chr1:144594800-144623400 Weak transcription HUVEC blood vessel
31 chr1:144594800-144624000 Weak transcription Right Ventricle heart
32 chr1:144595800-144623200 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr1:144596000-144607400 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr1:144596200-144608800 Weak transcription NHDF-Ad bronchial
35 chr1:144596200-144612200 Weak transcription NHEK skin
36 chr1:144596200-144616600 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr1:144596200-144618200 Weak transcription Primary T killer memory cells from peripheral blood blood
38 chr1:144596200-144621400 Weak transcription Pancreas Pancrea
39 chr1:144596400-144622000 Weak transcription NH-A brain
40 chr1:144598800-144621400 Weak transcription Colon Smooth Muscle Colon
41 chr1:144598800-144623600 Weak transcription Hela-S3 cervix
42 chr1:144599000-144608400 Weak transcription Spleen Spleen
43 chr1:144599000-144621200 Weak transcription Primary T helper naive cells from peripheral blood blood
44 chr1:144599200-144621600 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr1:144599400-144609000 Weak transcription Fetal Brain Female brain
46 chr1:144599400-144609600 Weak transcription Brain Cingulate Gyrus brain
47 chr1:144599400-144618000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr1:144599400-144618000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr1:144599400-144618200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr1:144599400-144619400 Weak transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015