Variant report

Variant rs587646142
Chromosome Location chr1:144946218-144946219
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:144934000-144949000 Weak transcription Spleen Spleen
2 chr1:144936600-144948800 Weak transcription Pancreas Pancrea
3 chr1:144937400-144948200 Weak transcription Primary B cells from cord blood blood
4 chr1:144937800-144948400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr1:144939200-144948800 Weak transcription Colonic Mucosa Colon
6 chr1:144939800-144952200 Strong transcription K562 blood
7 chr1:144941200-144946400 Weak transcription Fetal Intestine Small intestine
8 chr1:144941400-144946800 Weak transcription Stomach Mucosa stomach
9 chr1:144941600-144946800 Strong transcription Liver Liver
10 chr1:144941600-144946800 Weak transcription Ovary ovary
11 chr1:144941600-144950000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr1:144941600-144951000 Strong transcription Left Ventricle heart
13 chr1:144942200-144949600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr1:144942200-144960200 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr1:144942400-144949200 Strong transcription Fetal Muscle Trunk muscle
16 chr1:144942400-144951400 Strong transcription Brain Cingulate Gyrus brain
17 chr1:144942400-144952200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr1:144942600-144948000 Weak transcription NH-A brain
19 chr1:144942600-144948400 Weak transcription Primary T cells from cord blood blood
20 chr1:144942600-144948800 Weak transcription Small Intestine intestine
21 chr1:144942600-144952000 Strong transcription Osteobl bone
22 chr1:144942600-144952200 Strong transcription Placenta Placenta
23 chr1:144942800-144951800 Strong transcription HSMM muscle
24 chr1:144942800-144952200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr1:144942800-144952200 Strong transcription Muscle Satellite Cultured Cells --
26 chr1:144942800-144952200 Strong transcription HSMMtube muscle
27 chr1:144943000-144949000 Strong transcription Brain Inferior Temporal Lobe brain
28 chr1:144943200-144946800 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr1:144943200-144948000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr1:144943200-144953000 Weak transcription Fetal Brain Female brain
31 chr1:144943400-144947000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr1:144943400-144947800 Strong transcription Aorta Aorta
33 chr1:144943400-144949200 Strong transcription Fetal Muscle Leg muscle
34 chr1:144943400-144961000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr1:144944000-144946400 Strong transcription Skeletal Muscle Male skeletal muscle
36 chr1:144944000-144946600 Weak transcription Gastric stomach
37 chr1:144944000-144948600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr1:144944000-144948600 Weak transcription Rectal Smooth Muscle rectum
39 chr1:144944000-144948800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr1:144944000-144950000 Weak transcription Fetal Stomach stomach
41 chr1:144944000-144950000 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr1:144944000-144950600 Weak transcription Lung lung
43 chr1:144944000-144966200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr1:144944200-144950000 Weak transcription NHLF lung
45 chr1:144944800-144949000 Strong transcription Brain Hippocampus Middle brain
46 chr1:144944800-144949200 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
47 chr1:144945000-144946800 Strong transcription Pancreatic Islets Pancreatic Islet
48 chr1:144945000-144949200 Strong transcription Brain Anterior Caudate brain
49 chr1:144945000-144949200 Strong transcription Brain Substantia Nigra brain
50 chr1:144945200-144949000 Strong transcription NHDF-Ad bronchial

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