The 2.0 version of rSNPBase

Variant report

Variant rs587651127
Chromosome Location chr1:150047627-150047628
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150040000-150050200 Weak transcription Spleen Spleen
2 chr1:150040200-150090800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:150040400-150047800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr1:150040400-150047800 Weak transcription Primary T cells fromperipheralblood blood
5 chr1:150040400-150047800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr1:150040400-150049800 Weak transcription Ovary ovary
7 chr1:150040400-150049800 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr1:150040400-150050000 Weak transcription Lung lung
9 chr1:150040400-150056400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr1:150040400-150061600 Weak transcription Primary neutrophils fromperipheralblood blood
11 chr1:150040400-150078800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr1:150040400-150082800 Weak transcription Small Intestine intestine
13 chr1:150040400-150086800 Weak transcription Esophagus oesophagus
14 chr1:150040400-150121400 Weak transcription Pancreas Pancrea
15 chr1:150040600-150048200 Weak transcription H1 Cell Line embryonic stem cell
16 chr1:150040600-150072200 Weak transcription ES-WA7 Cell Line embryonic stem cell
17 chr1:150040600-150092000 Weak transcription ES-I3 Cell Line embryonic stem cell
18 chr1:150040800-150048400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr1:150040800-150048800 Weak transcription Primary B cells from cord blood blood
20 chr1:150040800-150049000 Weak transcription Primary T cells from cord blood blood
21 chr1:150040800-150049800 Weak transcription iPS-15b Cell Line embryonic stem cell
22 chr1:150040800-150049800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr1:150040800-150049800 Weak transcription Placenta Amnion Placenta Amnion
24 chr1:150040800-150054400 Weak transcription Aorta Aorta
25 chr1:150041000-150048200 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr1:150041000-150048200 Weak transcription Fetal Brain Female brain
27 chr1:150041000-150048800 Weak transcription Brain Inferior Temporal Lobe brain
28 chr1:150041000-150049200 Weak transcription Primary hematopoietic stem cells blood
29 chr1:150041000-150049800 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr1:150041000-150049800 Weak transcription Thymus Thymus
31 chr1:150041000-150049800 Weak transcription HSMMtube muscle
32 chr1:150041000-150053600 Weak transcription Primary T helper naive cells fromperipheralblood blood
33 chr1:150041000-150064000 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr1:150041000-150114400 Weak transcription Right Ventricle heart
35 chr1:150041200-150048800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr1:150041200-150049200 Weak transcription HepG2 liver
37 chr1:150041200-150049800 Weak transcription Rectal Smooth Muscle rectum
38 chr1:150041200-150054800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr1:150041400-150048600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr1:150041400-150048800 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr1:150041400-150049200 Weak transcription Brain Cingulate Gyrus brain
42 chr1:150041400-150049200 Weak transcription Brain Substantia Nigra brain
43 chr1:150041400-150049200 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr1:150041400-150049200 Weak transcription NHLF lung
45 chr1:150041400-150050000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr1:150041400-150053600 Weak transcription Fetal Kidney kidney
47 chr1:150041400-150055800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr1:150041400-150056000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr1:150041400-150066000 Weak transcription Pancreatic Islets Pancreatic Islet
50 chr1:150041400-150067800 Weak transcription H9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015