Variant report

Variant	rs587652082
Chromosome Location	chr1:145139637-145139638
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:83)
CpG islands
(count:0)
Chromatin interactive
region (count:2)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:83 , 50 per page) page: 1 2

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	PAX5	chr1:145138708-145140041	GM12878	blood:	n/a	n/a
2	POLR2A	chr1:145139623-145139926	H1-hESC	embryonic stem cell:	n/a	n/a
3	MAX	chr1:145139141-145139684	HCT-116	colon:	n/a	n/a
4	MAX	chr1:145139196-145139710	MCF-7	breast:	n/a	n/a
5	POLR2A	chr1:145139581-145139947	HepG2	liver:	n/a	n/a
6	POLR2A	chr1:145139182-145139961	Hela-S3	cervix:	n/a	n/a
7	POLR2A	chr1:145138814-145140185	GM12892	blood:	n/a	n/a
8	HEY1	chr1:145138876-145140110	K562	blood:	n/a	n/a
9	RXRA	chr1:145139627-145139964	HepG2	liver:	n/a	n/a
10	E2F6	chr1:145139292-145140051	K562	blood:	n/a	n/a
11	GATA2	chr1:145139628-145140051	K562	blood:	n/a	n/a
12	IRF4	chr1:145139622-145140015	GM12878	blood:	n/a	n/a
13	MAX	chr1:145139145-145139681	MCF-7	breast:	n/a	n/a
14	TCF7L2	chr1:145139453-145139950	PANC-1	pancreas:	n/a	n/a
15	POLR2A	chr1:145138994-145140154	Hela-S3	cervix:	n/a	n/a
16	POLR2A	chr1:145138833-145140106	SK-N-SH	brain:	n/a	n/a
17	TAF1	chr1:145139375-145140028	H1-hESC	embryonic stem cell:	n/a	n/a
18	SIN3AK20	chr1:145139244-145140095	SK-N-SH	brain:	n/a	n/a
19	POLR2A	chr1:145139298-145139959	GM12878	blood:	n/a	n/a
20	TAF1	chr1:145139387-145139976	HepG2	liver:	n/a	n/a
21	HEY1	chr1:145139610-145140016	HepG2	liver:	n/a	n/a
22	TAF1	chr1:145138907-145140090	Hela-S3	cervix:	n/a	n/a
23	POLR2A	chr1:145139386-145139987	H1-hESC	embryonic stem cell:	n/a	n/a
24	TCF12	chr1:145139373-145139920	GM12878	blood:	n/a	chr1:145139683-145139690
25	POLR2A	chr1:145139294-145139960	GM12878	blood:	n/a	n/a
26	POLR2A	chr1:145138877-145140182	U87	brain:	n/a	n/a
27	POLR2A	chr1:145139637-145139943	HepG2	liver:	n/a	n/a
28	POLR2A	chr1:145139254-145140017	MCF-7	breast:	n/a	n/a
29	POLR2A	chr1:145139272-145140039	GM12878	blood:	n/a	n/a
30	POLR2A	chr1:145139290-145140095	HUVEC	blood vessel:	n/a	n/a
31	TAF1	chr1:145139289-145139997	HepG2	liver:	n/a	n/a
32	SIN3AK20	chr1:145139624-145139998	HepG2	liver:	n/a	n/a
33	MYC	chr1:145139347-145139975	MCF-7	breast:	n/a	n/a
34	POLR2A	chr1:145138831-145140035	GM12878	blood:	n/a	n/a
35	POLR2A	chr1:145138891-145140131	K562	blood:	n/a	n/a
36	MAX	chr1:145139244-145139673	HepG2	liver:	n/a	n/a
37	POLR2A	chr1:145138907-145140074	MCF-7	breast:	n/a	n/a
38	MYBL2	chr1:145138822-145140100	HepG2	liver:	n/a	n/a
39	POLR2A	chr1:145139614-145139976	GM12891	blood:	n/a	n/a
40	POLR2A	chr1:145138847-145140156	ProgFib	skin:	n/a	n/a
41	YY1	chr1:145139611-145140019	A549	lung:	n/a	chr1:145139705-145139719 chr1:145139711-145139725
42	POLR2A	chr1:145139236-145140097	H1-hESC	embryonic stem cell:	n/a	n/a
43	POLR2A	chr1:145138724-145140324	PFSK-1	brain:	n/a	n/a
44	POLR2A	chr1:145139279-145139961	MCF-7	breast:	n/a	n/a
45	POLR2A	chr1:145138880-145140147	GM12892	blood:	n/a	n/a
46	POLR2A	chr1:145139218-145140028	A549	lung:	n/a	n/a
47	POLR2A	chr1:145138911-145139999	GM12891	blood:	n/a	n/a
48	POLR2A	chr1:145139251-145140007	GM12891	blood:	n/a	n/a
49	MYC	chr1:145139596-145139643	HepG2	liver:	n/a	n/a
50	POLR2A	chr1:145138866-145140109	PFSK-1	brain:	n/a	n/a

No data

(count:2 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:145138455..145140955-chr1:145381729..145384293,2	MCF-7	breast:
2	chr1:145137959..145140660-chr1:145381811..145384748,2	K562	blood:

No data

Variant related genes	Relation type
NUDT4P1	TF binding region
ENSG00000233396	Chromatin interaction
ENSG00000201558	Chromatin interaction

Extended variants
information (count: 52 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:52 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1001693	chr1:144471974-145290292	Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Weak transcription Genic enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	311 gene(s)	inside rSNPs	diseases
2	esv1830469	chr1:144679113-145320996	Active TSS Strong transcription Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	76 gene(s)	inside rSNPs	diseases
3	nsv1005230	chr1:144865627-145151820	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	66 gene(s)	inside rSNPs	diseases
4	esv1828244	chr1:144865627-145243316	Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Enhancers Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	73 gene(s)	inside rSNPs	diseases
5	nsv872214	chr1:144875799-145195645	Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	66 gene(s)	inside rSNPs	diseases
6	nsv1005055	chr1:144893406-145792052	Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	381 gene(s)	inside rSNPs	diseases
7	esv1819879	chr1:144902232-145287810	Flanking Active TSS Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	67 gene(s)	inside rSNPs	diseases
8	esv1822839	chr1:144902232-145393578	Flanking Active TSS Enhancers Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	266 gene(s)	inside rSNPs	diseases
9	esv1826561	chr1:144902232-145393578	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	266 gene(s)	inside rSNPs	diseases
10	esv1849727	chr1:144902232-145393578	Weak transcription Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	266 gene(s)	inside rSNPs	diseases
11	nsv1000018	chr1:144949963-145249507	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	52 gene(s)	inside rSNPs	diseases
12	nsv1000851	chr1:144949963-145276259	Flanking Active TSS Enhancers Weak transcription Active TSS Genic enhancers Bivalent Enhancer Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	52 gene(s)	inside rSNPs	diseases
13	nsv1012982	chr1:144949963-145290292	Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	52 gene(s)	inside rSNPs	diseases
14	nsv1003688	chr1:144949963-145398179	Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	257 gene(s)	inside rSNPs	diseases
15	nsv1012811	chr1:144950969-145152745	Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
16	nsv432720	chr1:144956393-145727683	Enhancers Genic enhancers Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	363 gene(s)	inside rSNPs	diseases
17	esv2761299	chr1:144957688-145366695	Enhancers Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	52 gene(s)	inside rSNPs	diseases
18	nsv998771	chr1:144986365-145687024	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	362 gene(s)	inside rSNPs	diseases
19	nsv535079	chr1:144986365-145687024	Weak transcription Flanking Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	362 gene(s)	inside rSNPs	diseases
20	nsv1000202	chr1:144988936-145290292	Active TSS Enhancers ZNF genes & repeats Genic enhancers Strong transcription Bivalent Enhancer Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	52 gene(s)	inside rSNPs	diseases
21	nsv872217	chr1:144990981-145195645	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
22	nsv1001648	chr1:144994930-145257170	Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
23	nsv1010311	chr1:144994930-145276259	Weak transcription Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
24	nsv1014270	chr1:144994930-145288338	Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
25	nsv933296	chr1:144994945-145740657	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	359 gene(s)	inside rSNPs	diseases
26	nsv1002736	chr1:145023783-145372551	Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
27	nsv997316	chr1:145028841-145290292	Flanking Active TSS Active TSS Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
28	nsv872219	chr1:145031011-145175611	Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
29	nsv872220	chr1:145041251-145195645	Genic enhancers Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
30	nsv872221	chr1:145044288-145195645	Flanking Bivalent TSS/Enh Strong transcription Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
31	nsv427752	chr1:145057218-145483353	Weak transcription Enhancers Bivalent Enhancer Active TSS Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	307 gene(s)	inside rSNPs	diseases
32	nsv872222	chr1:145073750-145273487	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
33	nsv436262	chr1:145078928-145189542	Enhancers Active TSS Genic enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
34	nsv1001969	chr1:145079984-145290292	Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
35	esv3512579	chr1:145080063-145189600	Genic enhancers Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
36	esv3512581	chr1:145080064-145189537	Genic enhancers Enhancers Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
37	esv3512580	chr1:145080099-145189508	Enhancers Weak transcription Active TSS Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
38	esv3363722	chr1:145080119-145189478	Flanking Active TSS Weak transcription Enhancers Genic enhancers ZNF genes & repeats Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
39	nsv435903	chr1:145080122-145192318	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
40	esv3512582	chr1:145080158-145189464	Flanking Active TSS Strong transcription Weak transcription Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
41	nsv1000082	chr1:145081821-145687024	Flanking Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	347 gene(s)	inside rSNPs	diseases
42	nsv535081	chr1:145081821-145687024	Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	347 gene(s)	inside rSNPs	diseases
43	esv1824820	chr1:145086810-145393578	Weak transcription Enhancers Bivalent Enhancer Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	233 gene(s)	inside rSNPs	diseases
44	nsv1013404	chr1:145086995-145249507	Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	32 gene(s)	inside rSNPs	diseases
45	nsv998789	chr1:145100386-145406787	Weak transcription Enhancers Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	226 gene(s)	inside rSNPs	diseases
46	nsv2655	chr1:145117496-145218404	Strong transcription Enhancers Flanking Active TSS Weak transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
47	esv3517832	chr1:145124263-145183706	Enhancers Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
48	nsv1008368	chr1:145124481-145152745	Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
49	esv3517833	chr1:145124709-145183497	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
50	esv3517834	chr1:145124810-145183395	Enhancers Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:116 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:145138400-145140000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr1:145139000-145139800	Active TSS	Primary Natural Killer cells fromperipheralblood	blood
3	chr1:145139000-145140000	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
4	chr1:145139000-145140000	Active TSS	Primary monocytes fromperipheralblood	blood
5	chr1:145139000-145140000	Active TSS	Primary neutrophils fromperipheralblood	blood
6	chr1:145139000-145140000	Active TSS	Primary B cells from cord blood	blood
7	chr1:145139000-145140000	Active TSS	Primary B cells from peripheral blood	blood
8	chr1:145139000-145140000	Active TSS	Primary T cells fromperipheralblood	blood
9	chr1:145139000-145140000	Active TSS	Primary T helper naive cells fromperipheralblood	blood
10	chr1:145139000-145140000	Active TSS	Primary T helper 17 cells PMA-I stimulated	--
11	chr1:145139000-145140000	Active TSS	Primary T killer naive cells fromperipheralblood	blood
12	chr1:145139000-145140000	Active TSS	Muscle Satellite Cultured Cells	--
13	chr1:145139000-145140000	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr1:145139000-145140000	Active TSS	Adipose Nuclei	Adipose
15	chr1:145139000-145140000	Active TSS	Thymus	Thymus
16	chr1:145139000-145140000	Active TSS	Hela-S3	cervix
17	chr1:145139000-145140000	Active TSS	HSMM	muscle
18	chr1:145139000-145140000	Active TSS	HUVEC	blood vessel
19	chr1:145139000-145140000	Active TSS	Monocytes-CD14+_RO01746	blood
20	chr1:145139000-145140000	Active TSS	NHEK	skin
21	chr1:145139000-145140200	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
22	chr1:145139000-145140200	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
23	chr1:145139000-145140200	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
24	chr1:145139000-145140200	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
25	chr1:145139000-145140200	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
26	chr1:145139000-145140200	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
27	chr1:145139000-145140200	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
28	chr1:145139000-145140200	Active TSS	Liver	Liver
29	chr1:145139000-145140200	Active TSS	Brain Cingulate Gyrus	brain
30	chr1:145139000-145140200	Active TSS	Brain Germinal Matrix	brain
31	chr1:145139000-145140200	Active TSS	Duodenum Mucosa	Duodenum
32	chr1:145139000-145140200	Active TSS	Fetal Kidney	kidney
33	chr1:145139000-145140200	Active TSS	Fetal Muscle Leg	muscle
34	chr1:145139000-145140200	Active TSS	Psoas Muscle	Psoas
35	chr1:145139000-145140200	Active TSS	Rectal Mucosa Donor 29	rectum
36	chr1:145139000-145140200	Active TSS	Rectal Mucosa Donor 31	rectum
37	chr1:145139000-145140200	Active TSS	Rectal Smooth Muscle	rectum
38	chr1:145139000-145140200	Active TSS	Skeletal Muscle Male	skeletal muscle
39	chr1:145139000-145140200	Active TSS	Skeletal Muscle Female	skeletal muscle
40	chr1:145139000-145140200	Active TSS	Stomach Smooth Muscle	stomach
41	chr1:145139000-145140200	Active TSS	HSMMtube	muscle
42	chr1:145139000-145140200	Active TSS	NHDF-Ad	bronchial
43	chr1:145139000-145140800	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
44	chr1:145139200-145139800	Bivalent/Poised TSS	iPS DF 6.9 Cell Line	embryonic stem cell
45	chr1:145139200-145139800	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
46	chr1:145139200-145139800	Active TSS	Fetal Thymus	thymus
47	chr1:145139200-145140000	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
48	chr1:145139200-145140000	Bivalent/Poised TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
49	chr1:145139200-145140000	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
50	chr1:145139200-145140000	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links