Variant report

Variant rs587652109
Chromosome Location chr1:144942786-144942787
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:144933200-144943800 Weak transcription Lung lung
2 chr1:144934000-144949000 Weak transcription Spleen Spleen
3 chr1:144935400-144944000 Genic enhancers Skeletal Muscle Male skeletal muscle
4 chr1:144935400-144944000 Genic enhancers Skeletal Muscle Female skeletal muscle
5 chr1:144936600-144948800 Weak transcription Pancreas Pancrea
6 chr1:144937000-144943800 Weak transcription Esophagus oesophagus
7 chr1:144937200-144943800 Weak transcription Gastric stomach
8 chr1:144937400-144948200 Weak transcription Primary B cells from cord blood blood
9 chr1:144937800-144948400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr1:144938600-144943600 Weak transcription Primary neutrophils fromperipheralblood blood
11 chr1:144939200-144948800 Weak transcription Colonic Mucosa Colon
12 chr1:144939400-144943200 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr1:144939400-144943200 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr1:144939400-144943200 Weak transcription HepG2 liver
15 chr1:144939800-144944000 Enhancers Fetal Stomach stomach
16 chr1:144939800-144952200 Strong transcription K562 blood
17 chr1:144940000-144943200 Enhancers Cortex derived primary cultured neurospheres brain
18 chr1:144940200-144942800 Enhancers iPS-15b Cell Line embryonic stem cell
19 chr1:144940200-144942800 Enhancers Placenta Amnion Placenta Amnion
20 chr1:144940200-144943200 Enhancers iPS-18 Cell Line embryonic stem cell
21 chr1:144940400-144943000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
22 chr1:144940400-144944000 Enhancers Colon Smooth Muscle Colon
23 chr1:144940600-144943400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr1:144940600-144943400 Genic enhancers Fetal Muscle Leg muscle
25 chr1:144940600-144944000 Enhancers Rectal Smooth Muscle rectum
26 chr1:144940800-144944000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr1:144941000-144946200 Weak transcription Fetal Intestine Large intestine
28 chr1:144941200-144942800 Genic enhancers Fetal Heart heart
29 chr1:144941200-144943000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr1:144941200-144943800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr1:144941200-144946400 Weak transcription Fetal Intestine Small intestine
32 chr1:144941400-144942800 Genic enhancers Brain Anterior Caudate brain
33 chr1:144941400-144943200 Enhancers Fetal Brain Female brain
34 chr1:144941400-144943400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr1:144941400-144946800 Weak transcription Stomach Mucosa stomach
36 chr1:144941600-144943200 Enhancers HUES48 Cell Line embryonic stem cell
37 chr1:144941600-144943200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
38 chr1:144941600-144943600 Enhancers Pancreatic Islets Pancreatic Islet
39 chr1:144941600-144943800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr1:144941600-144944000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
41 chr1:144941600-144945800 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr1:144941600-144946800 Strong transcription Liver Liver
43 chr1:144941600-144946800 Weak transcription Ovary ovary
44 chr1:144941600-144950000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr1:144941600-144951000 Strong transcription Left Ventricle heart
46 chr1:144941800-144942800 Enhancers Fetal Lung lung
47 chr1:144941800-144942800 Genic enhancers HSMM muscle
48 chr1:144941800-144942800 Genic enhancers HSMMtube muscle
49 chr1:144941800-144943000 Weak transcription Brain Inferior Temporal Lobe brain
50 chr1:144941800-144943400 Strong transcription Adipose Nuclei Adipose

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