Variant report

Variant rs587730280
Chromosome Location chr1:145118062-145118063
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145097800-145130000 Weak transcription Right Ventricle heart
2 chr1:145098200-145122400 Weak transcription Brain Substantia Nigra brain
3 chr1:145099800-145119400 Weak transcription Brain Cingulate Gyrus brain
4 chr1:145099800-145122400 Weak transcription Brain Germinal Matrix brain
5 chr1:145109200-145118200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
6 chr1:145109200-145118400 Strong transcription Primary T cells fromperipheralblood blood
7 chr1:145110000-145118200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr1:145110200-145122000 Weak transcription Brain Hippocampus Middle brain
9 chr1:145110400-145119600 Weak transcription Brain Inferior Temporal Lobe brain
10 chr1:145110800-145118400 Strong transcription Primary T helper cells fromperipheralblood blood
11 chr1:145111200-145118400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr1:145111600-145118400 Strong transcription Primary T helper cells PMA-I stimulated --
13 chr1:145111600-145122600 Weak transcription Spleen Spleen
14 chr1:145112600-145119600 Weak transcription Primary hematopoietic stem cells short term culture blood
15 chr1:145113200-145129600 Weak transcription Fetal Heart heart
16 chr1:145113800-145121600 Weak transcription H1 Cell Line embryonic stem cell
17 chr1:145114400-145118400 Genic enhancers HSMM muscle
18 chr1:145114800-145118400 Strong transcription Primary hematopoietic stem cells blood
19 chr1:145114800-145120200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr1:145115000-145119600 Weak transcription Fetal Brain Male brain
21 chr1:145115200-145130000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr1:145115400-145118400 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr1:145115400-145118400 Strong transcription NH-A brain
24 chr1:145115400-145118400 Genic enhancers Osteobl bone
25 chr1:145115600-145118400 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr1:145115600-145118400 Strong transcription Liver Liver
27 chr1:145115600-145118400 Strong transcription Fetal Intestine Large intestine
28 chr1:145115600-145120200 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr1:145115600-145128200 Weak transcription HMEC breast
30 chr1:145115800-145118200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr1:145115800-145118400 Genic enhancers Primary monocytes fromperipheralblood blood
32 chr1:145115800-145118400 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
33 chr1:145115800-145118400 Genic enhancers Adipose Nuclei Adipose
34 chr1:145115800-145118400 Strong transcription HUVEC blood vessel
35 chr1:145116200-145118600 Weak transcription Fetal Muscle Trunk muscle
36 chr1:145116200-145119000 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr1:145116200-145119600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr1:145116200-145119600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr1:145116200-145121600 Weak transcription H9 Cell Line embryonic stem cell
40 chr1:145116200-145130000 Weak transcription Skeletal Muscle Female skeletal muscle
41 chr1:145116400-145130000 Weak transcription Thymus Thymus
42 chr1:145116600-145118200 Weak transcription Fetal Brain Female brain
43 chr1:145116600-145120800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr1:145116800-145118400 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr1:145116800-145118400 Strong transcription Placenta Placenta
46 chr1:145116800-145119000 Strong transcription Primary T cells from cord blood blood
47 chr1:145116800-145119600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr1:145116800-145119600 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr1:145116800-145119800 Weak transcription Rectal Mucosa Donor 31 rectum
50 chr1:145116800-145120800 Weak transcription Fetal Muscle Leg muscle

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