Variant report

Variant rs587773107
Chromosome Location chr1:145216419-145216420
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145210200-145230400 Weak transcription Spleen Spleen
2 chr1:145210600-145217000 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr1:145210600-145217200 Enhancers Primary B cells from peripheral blood blood
4 chr1:145210600-145219200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr1:145210800-145220200 Weak transcription Fetal Muscle Trunk muscle
6 chr1:145210800-145220200 Weak transcription Right Ventricle heart
7 chr1:145211600-145219800 Weak transcription Brain Substantia Nigra brain
8 chr1:145211600-145246400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
9 chr1:145211800-145219000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr1:145211800-145219200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr1:145211800-145219200 Weak transcription Duodenum Mucosa Duodenum
12 chr1:145211800-145219200 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr1:145211800-145219200 Weak transcription Right Atrium heart
14 chr1:145211800-145220800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr1:145211800-145223400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr1:145212000-145218200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr1:145212200-145219200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr1:145212200-145221800 Weak transcription Primary T regulatory cells fromperipheralblood blood
19 chr1:145212400-145230200 Weak transcription Fetal Intestine Large intestine
20 chr1:145212800-145217400 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr1:145212800-145219200 Weak transcription iPS-15b Cell Line embryonic stem cell
22 chr1:145212800-145241600 Weak transcription Fetal Stomach stomach
23 chr1:145213200-145216600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr1:145213200-145219200 Weak transcription Thymus Thymus
25 chr1:145213400-145219000 Weak transcription HUES48 Cell Line embryonic stem cell
26 chr1:145213400-145219200 Weak transcription NHLF lung
27 chr1:145213400-145220200 Weak transcription Small Intestine intestine
28 chr1:145213600-145216800 Weak transcription NHDF-Ad bronchial
29 chr1:145213600-145217800 Enhancers HMEC breast
30 chr1:145213600-145219200 Weak transcription Pancreas Pancrea
31 chr1:145213600-145219200 Weak transcription Rectal Smooth Muscle rectum
32 chr1:145213600-145221800 Weak transcription Brain Hippocampus Middle brain
33 chr1:145213800-145216800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr1:145213800-145217000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr1:145213800-145219200 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr1:145213800-145219200 Weak transcription HUES64 Cell Line embryonic stem cell
37 chr1:145213800-145219200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr1:145213800-145219200 Weak transcription Stomach Smooth Muscle stomach
39 chr1:145213800-145220200 Weak transcription Fetal Thymus thymus
40 chr1:145213800-145224000 Weak transcription Primary neutrophils fromperipheralblood blood
41 chr1:145213800-145224000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr1:145214200-145219200 Weak transcription Fetal Heart heart
43 chr1:145214400-145216600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
44 chr1:145214400-145217200 Enhancers Primary T helper naive cells fromperipheralblood blood
45 chr1:145214400-145217200 Enhancers Psoas Muscle Psoas
46 chr1:145214400-145217600 Enhancers Primary T helper cells PMA-I stimulated --
47 chr1:145214600-145216600 Enhancers Breast Myoepithelial Primary Cells Breast
48 chr1:145214600-145216800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr1:145214600-145218400 Enhancers Liver Liver
50 chr1:145214800-145217400 Enhancers Skeletal Muscle Female skeletal muscle

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