Variant report

Variant	rs58874286
Chromosome Location	chr8:110616186-110616187
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:110551172..110552900-chr8:110613869..110616553,2	MCF-7	breast:
2	chr8:110598326..110600037-chr8:110615498..110618470,2	K562	blood:

Variant related genes	Relation type
ENSG00000147654	Chromatin interaction
ENSG00000147642	Chromatin interaction

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs6989019	0.92[ASN][1000 genomes]
rs7833753	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1849702	chr8:110594148-110683804	Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:110590200-110654800	Weak transcription	Lung	lung
2	chr8:110607000-110617000	Weak transcription	Hela-S3	cervix
3	chr8:110610600-110618200	Weak transcription	GM12878-XiMat	blood
4	chr8:110610600-110618600	Weak transcription	HMEC	breast
5	chr8:110611800-110617600	Enhancers	Pancreas	Pancrea
6	chr8:110612200-110624200	Weak transcription	Aorta	Aorta
7	chr8:110612400-110616800	Enhancers	Cortex derived primary cultured neurospheres	brain
8	chr8:110613000-110617400	Enhancers	HepG2	liver
9	chr8:110613600-110616800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr8:110613600-110616800	Weak transcription	Brain Cingulate Gyrus	brain
11	chr8:110613600-110620800	Enhancers	Fetal Intestine Small	intestine
12	chr8:110613800-110617000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr8:110613800-110618400	Weak transcription	HUVEC	blood vessel
14	chr8:110614000-110616800	Weak transcription	Brain Germinal Matrix	brain
15	chr8:110614000-110616800	Weak transcription	Gastric	stomach
16	chr8:110614000-110617000	Weak transcription	A549	lung
17	chr8:110614000-110619600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
18	chr8:110614200-110618800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr8:110614200-110619400	Weak transcription	NHLF	lung
20	chr8:110614400-110616800	Weak transcription	Sigmoid Colon	Sigmoid Colon
21	chr8:110614600-110616800	Weak transcription	Brain Angular Gyrus	brain
22	chr8:110614600-110619600	Weak transcription	Brain Substantia Nigra	brain
23	chr8:110614800-110616200	Enhancers	Fetal Intestine Large	intestine
24	chr8:110615000-110616200	Enhancers	Brain Hippocampus Middle	brain
25	chr8:110615000-110616200	Enhancers	Skeletal Muscle Female	skeletal muscle
26	chr8:110615000-110616200	Enhancers	HSMM	muscle
27	chr8:110615000-110616800	Weak transcription	NHEK	skin
28	chr8:110615000-110617000	Enhancers	Skeletal Muscle Male	skeletal muscle
29	chr8:110615200-110616200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
30	chr8:110615200-110616200	Enhancers	Muscle Satellite Cultured Cells	--
31	chr8:110615200-110616200	Enhancers	Adipose Nuclei	Adipose
32	chr8:110615200-110616200	Flanking Active TSS	Fetal Brain Female	brain
33	chr8:110615200-110616200	Enhancers	Psoas Muscle	Psoas
34	chr8:110615200-110616200	Enhancers	Rectal Smooth Muscle	rectum
35	chr8:110615200-110616400	Genic enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
36	chr8:110615200-110617800	Enhancers	Stomach Smooth Muscle	stomach
37	chr8:110615200-110618000	Enhancers	Colon Smooth Muscle	Colon
38	chr8:110615400-110616200	Enhancers	Breast Myoepithelial Primary Cells	Breast
39	chr8:110615400-110616400	Weak transcription	Brain Anterior Caudate	brain
40	chr8:110615400-110616600	Weak transcription	Brain Inferior Temporal Lobe	brain
41	chr8:110615400-110617400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
42	chr8:110615400-110619600	Weak transcription	Esophagus	oesophagus
43	chr8:110615600-110616200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
44	chr8:110615600-110616800	Enhancers	Rectal Mucosa Donor 31	rectum
45	chr8:110615600-110617000	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
46	chr8:110615600-110618000	Enhancers	Liver	Liver
47	chr8:110615600-110618600	Weak transcription	Colonic Mucosa	Colon
48	chr8:110615600-110620400	Enhancers	Duodenum Mucosa	Duodenum
49	chr8:110615600-110623000	Weak transcription	Rectal Mucosa Donor 29	rectum
50	chr8:110615800-110616200	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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