Variant report
Variant | rs58888465 |
---|---|
Chromosome Location | chr7:120015600-120015601 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr7:120014784..120016778-chr7:120018789..120020521,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs57062655 | 1.00[EUR][1000 genomes] |
rs57378289 | 0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs57411631 | 1.00[EUR][1000 genomes] |
rs57417999 | 1.00[EUR][1000 genomes] |
rs57687096 | 1.00[EUR][1000 genomes] |
rs58100103 | 1.00[EUR][1000 genomes] |
rs61104791 | 1.00[EUR][1000 genomes] |
rs61430585 | 1.00[EUR][1000 genomes] |
rs73431930 | 1.00[EUR][1000 genomes] |
rs73431937 | 1.00[EUR][1000 genomes] |
rs73431947 | 1.00[EUR][1000 genomes] |
rs73431954 | 1.00[EUR][1000 genomes] |
rs73431966 | 1.00[EUR][1000 genomes] |
rs73431968 | 1.00[EUR][1000 genomes] |
rs73431971 | 1.00[EUR][1000 genomes] |
rs73431979 | 1.00[EUR][1000 genomes] |
rs73431984 | 1.00[EUR][1000 genomes] |
rs73431991 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs73433807 | 1.00[EUR][1000 genomes] |
rs73433825 | 1.00[EUR][1000 genomes] |
rs73433829 | 1.00[EUR][1000 genomes] |
rs73433850 | 1.00[EUR][1000 genomes] |
rs73433858 | 1.00[EUR][1000 genomes] |
rs73433862 | 1.00[EUR][1000 genomes] |
rs73433873 | 1.00[EUR][1000 genomes] |
rs73433887 | 1.00[EUR][1000 genomes] |
rs73433890 | 1.00[EUR][1000 genomes] |
rs73433898 | 1.00[EUR][1000 genomes] |
rs73435825 | 1.00[EUR][1000 genomes] |
rs73435842 | 1.00[EUR][1000 genomes] |
rs73435846 | 1.00[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv1024920 | chr7:120002420-120083753 | Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Genic enhancers | Chromatin interactive region | n/a | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr7:120011800-120024400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |