The 2.0 version of rSNPBase

Variant report

Variant rs58917178
Chromosome Location chr12:9966276-9966277
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:9964000-9966400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
2 chr12:9966200-9966400 Enhancers H1 Cell Line embryonic stem cell
3 chr12:9966200-9966400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr12:9966200-9966400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
5 chr12:9966200-9966400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
6 chr12:9966200-9966400 Enhancers Primary B cells from peripheral blood blood
7 chr12:9966200-9966400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
8 chr12:9966200-9966400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
9 chr12:9966200-9966400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
10 chr12:9966200-9966400 Bivalent Enhancer Primary T helper 17 cells PMA-I stimulated --
11 chr12:9966200-9966400 Bivalent/Poised TSS Primary T regulatory cells fromperipheralblood blood
12 chr12:9966200-9966400 Bivalent Enhancer Primary T cells effector/memory enriched fromperipheralblood blood
13 chr12:9966200-9966400 Enhancers Primary T killer naive cells fromperipheralblood blood
14 chr12:9966200-9966400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr12:9966200-9966400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
16 chr12:9966200-9966400 Enhancers Adipose Nuclei Adipose
17 chr12:9966200-9966400 Enhancers Esophagus oesophagus
18 chr12:9966200-9966400 Bivalent Enhancer A549 lung
19 chr12:9966200-9966400 Enhancers Dnd41 blood
20 chr12:9966200-9966400 Enhancers GM12878-XiMat blood
21 chr12:9966200-9966600 Flanking Active TSS Primary T cells from cord blood blood
22 chr12:9966200-9966600 Enhancers Small Intestine intestine
23 chr12:9966200-9966800 Flanking Active TSS Primary B cells from cord blood blood
24 chr12:9966200-9966800 Flanking Bivalent TSS/Enh Primary T cells fromperipheralblood blood
25 chr12:9966200-9966800 Flanking Active TSS Primary hematopoietic stem cells blood
26 chr12:9966200-9966800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
27 chr12:9966200-9966800 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
28 chr12:9966200-9966800 Flanking Active TSS Thymus Thymus
29 chr12:9966200-9967000 Flanking Active TSS Primary monocytes fromperipheralblood blood
30 chr12:9966200-9967000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
31 chr12:9966200-9967000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
32 chr12:9966200-9967000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
33 chr12:9966200-9967000 Active TSS Primary T killer memory cells from peripheral blood blood
34 chr12:9966200-9967000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr12:9966200-9967000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr12:9966200-9967000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr12:9966200-9967000 Flanking Active TSS Fetal Thymus thymus
38 chr12:9966200-9967000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
39 chr12:9966200-9967200 Active TSS iPS-15b Cell Line embryonic stem cell
40 chr12:9966200-9967200 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015