Variant report

Variant rs58921396
Chromosome Location chr2:11697623-11697624
allele A/C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:11678400-11757000 Weak transcription Right Ventricle heart
2 chr2:11683400-11697800 Weak transcription iPS-20b Cell Line embryonic stem cell
3 chr2:11690000-11711000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr2:11691400-11699800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr2:11694200-11698400 Weak transcription H9 Cell Line embryonic stem cell
6 chr2:11694200-11698400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr2:11694600-11698200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr2:11694800-11698000 Strong transcription HepG2 liver
9 chr2:11694800-11699200 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr2:11694800-11699600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr2:11694800-11755200 Weak transcription Gastric stomach
12 chr2:11696000-11699800 Active TSS Pancreatic Islets Pancreatic Islet
13 chr2:11696200-11700400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr2:11696400-11700200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr2:11696800-11697800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr2:11696800-11697800 Active TSS HUES6 Cell Line embryonic stem cell
17 chr2:11696800-11698200 Weak transcription HUES64 Cell Line embryonic stem cell
18 chr2:11697000-11697800 Enhancers Brain Substantia Nigra brain
19 chr2:11697000-11698600 Weak transcription Brain Inferior Temporal Lobe brain
20 chr2:11697000-11702200 Weak transcription Pancreas Pancrea
21 chr2:11697000-11706800 Weak transcription Brain Cingulate Gyrus brain
22 chr2:11697000-11710800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr2:11697000-11722600 Weak transcription Brain Hippocampus Middle brain
24 chr2:11697000-11723000 Weak transcription Brain Anterior Caudate brain
25 chr2:11697000-11723200 Weak transcription Brain Angular Gyrus brain
26 chr2:11697400-11698200 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr2:11697400-11699000 Bivalent Enhancer Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr2:11697600-11698000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr2:11697600-11698000 Enhancers HUES48 Cell Line embryonic stem cell
30 chr2:11697600-11698600 Enhancers H1 Cell Line embryonic stem cell
31 chr2:11697600-11699800 Genic enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr2:11697600-11699800 Enhancers Fetal Heart heart
33 chr2:11697600-11700200 Enhancers Left Ventricle heart
34 chr2:11697600-11700400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr2:11697600-11700600 Transcr. at gene 5' and 3' Ovary ovary

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