The 2.0 version of rSNPBase

Variant report

Variant rs58960035
Chromosome Location chr5:42584354-42584355
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:22 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:42572200-42587800 Weak transcription Left Ventricle heart
2 chr5:42573600-42586600 Weak transcription Psoas Muscle Psoas
3 chr5:42580000-42586400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr5:42583000-42586800 Enhancers Skeletal Muscle Female skeletal muscle
5 chr5:42583000-42587400 Enhancers Skeletal Muscle Male skeletal muscle
6 chr5:42583000-42588200 Enhancers Liver Liver
7 chr5:42583000-42590800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr5:42583200-42586400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr5:42583200-42586600 Weak transcription Fetal Lung lung
10 chr5:42583200-42586600 Weak transcription Ovary ovary
11 chr5:42583200-42587200 Enhancers Fetal Heart heart
12 chr5:42583200-42588400 Enhancers Breast Myoepithelial Primary Cells Breast
13 chr5:42583200-42591000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr5:42583200-42591200 Weak transcription Lung lung
15 chr5:42583200-42591200 Weak transcription Spleen Spleen
16 chr5:42583400-42585600 Enhancers K562 blood
17 chr5:42583400-42590000 Weak transcription Right Ventricle heart
18 chr5:42583800-42586200 Weak transcription Fetal Stomach stomach
19 chr5:42583800-42586200 Weak transcription Stomach Smooth Muscle stomach
20 chr5:42583800-42586600 Weak transcription Adipose Nuclei Adipose
21 chr5:42583800-42586600 Weak transcription Fetal Muscle Leg muscle
22 chr5:42583800-42591200 Weak transcription Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015