The 2.0 version of rSNPBase

Variant report

Variant rs58993488
Chromosome Location chr2:73221002-73221003
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:73168800-73226800 Weak transcription NHLF lung
2 chr2:73176600-73227400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr2:73183200-73228200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr2:73190600-73234400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr2:73193600-73221200 Weak transcription Rectal Smooth Muscle rectum
6 chr2:73194200-73248800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr2:73207800-73263200 Weak transcription H9 Cell Line embryonic stem cell
8 chr2:73208000-73247600 Weak transcription Primary B cells from cord blood blood
9 chr2:73208200-73227000 Weak transcription Muscle Satellite Cultured Cells --
10 chr2:73208400-73227400 Weak transcription A549 lung
11 chr2:73208400-73227600 Weak transcription iPS-20b Cell Line embryonic stem cell
12 chr2:73208600-73227200 Weak transcription Colon Smooth Muscle Colon
13 chr2:73209000-73227000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr2:73209000-73227200 Weak transcription HSMM muscle
15 chr2:73210400-73227200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr2:73210600-73225400 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr2:73211000-73258400 Weak transcription Colonic Mucosa Colon
18 chr2:73211600-73221800 Weak transcription Fetal Brain Male brain
19 chr2:73211600-73235800 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr2:73212000-73223000 Weak transcription Brain Angular Gyrus brain
21 chr2:73212000-73225400 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr2:73212200-73247400 Weak transcription HSMMtube muscle
23 chr2:73212400-73227400 Weak transcription Adipose Nuclei Adipose
24 chr2:73212400-73236000 Weak transcription Esophagus oesophagus
25 chr2:73212800-73238800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr2:73213800-73221800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr2:73213800-73222600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr2:73213800-73227400 Weak transcription Gastric stomach
29 chr2:73213800-73236200 Weak transcription Pancreas Pancrea
30 chr2:73214000-73222000 Weak transcription Fetal Thymus thymus
31 chr2:73214000-73232000 Weak transcription Aorta Aorta
32 chr2:73214000-73238400 Weak transcription Fetal Lung lung
33 chr2:73214200-73225600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr2:73214200-73247800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr2:73214200-73286400 Weak transcription Psoas Muscle Psoas
36 chr2:73215200-73228400 Weak transcription Placenta Placenta
37 chr2:73215400-73236000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr2:73215800-73223800 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr2:73215800-73235600 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr2:73215800-73247400 Weak transcription Thymus Thymus
41 chr2:73215800-73263000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
42 chr2:73216000-73223000 Weak transcription Skeletal Muscle Male skeletal muscle
43 chr2:73216000-73236000 Weak transcription Duodenum Mucosa Duodenum
44 chr2:73216200-73222600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
45 chr2:73216200-73225400 Weak transcription Lung lung
46 chr2:73216200-73227600 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr2:73216200-73248800 Weak transcription Primary hematopoietic stem cells blood
48 chr2:73216400-73223000 Weak transcription Fetal Intestine Large intestine
49 chr2:73216400-73224000 Enhancers Liver Liver
50 chr2:73216800-73234400 Weak transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015