Variant report

Variant	rs58997800
Chromosome Location	chr5:40489250-40489251
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:40488452..40490117-chr5:40490655..40492958,2	K562	blood:

rs_ID	r²[population]
rs59321002	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6890006	1.00[AMR][1000 genomes]

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:40479600-40490400	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr5:40483200-40490000	Enhancers	Primary hematopoietic stem cells	blood
3	chr5:40483400-40492200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr5:40483600-40492800	Enhancers	Primary monocytes fromperipheralblood	blood
5	chr5:40485800-40491600	Weak transcription	Adipose Nuclei	Adipose
6	chr5:40485800-40495400	Weak transcription	Sigmoid Colon	Sigmoid Colon
7	chr5:40487000-40490600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
8	chr5:40487400-40489800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
9	chr5:40487400-40490600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr5:40487400-40490600	Weak transcription	Primary T helper cells fromperipheralblood	blood
11	chr5:40487600-40497400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr5:40487600-40498800	Weak transcription	Osteobl	bone
13	chr5:40487800-40490400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
14	chr5:40487800-40490600	Weak transcription	Primary neutrophils fromperipheralblood	blood
15	chr5:40487800-40490800	Weak transcription	HSMM	muscle
16	chr5:40487800-40491800	Weak transcription	HMEC	breast
17	chr5:40488000-40489600	Weak transcription	Primary T helper cells PMA-I stimulated	--
18	chr5:40488000-40490400	Weak transcription	Primary B cells from cord blood	blood
19	chr5:40488000-40492200	Enhancers	GM12878-XiMat	blood
20	chr5:40488200-40490400	Weak transcription	Primary B cells from peripheral blood	blood
21	chr5:40488200-40490600	Enhancers	Monocytes-CD14+_RO01746	blood
22	chr5:40488200-40492400	Enhancers	Primary hematopoietic stem cells short term culture	blood
23	chr5:40488200-40494800	Weak transcription	Duodenum Mucosa	Duodenum
24	chr5:40488600-40490400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
25	chr5:40489200-40494800	Weak transcription	Fetal Intestine Large	intestine

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