Variant report

Variant rs58999825
Chromosome Location chr11:67208426-67208427
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:67196800-67210200 Weak transcription Fetal Kidney kidney
2 chr11:67197200-67209400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
3 chr11:67197200-67209800 Weak transcription Fetal Heart heart
4 chr11:67197200-67210000 Strong transcription Fetal Brain Female brain
5 chr11:67197200-67210000 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr11:67197400-67209400 Strong transcription Fetal Intestine Large intestine
7 chr11:67197600-67209400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
8 chr11:67198200-67209600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr11:67198200-67209600 Strong transcription Cortex derived primary cultured neurospheres brain
10 chr11:67198200-67209800 Strong transcription NHLF lung
11 chr11:67200600-67208800 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
12 chr11:67201000-67209800 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr11:67201600-67210000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr11:67202200-67210200 Genic enhancers Breast Myoepithelial Primary Cells Breast
15 chr11:67202400-67209800 Weak transcription HepG2 liver
16 chr11:67202400-67210200 Weak transcription Psoas Muscle Psoas
17 chr11:67203200-67210000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr11:67203200-67210400 Weak transcription Ovary ovary
19 chr11:67203800-67209800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr11:67203800-67210400 Weak transcription Aorta Aorta
21 chr11:67204800-67209400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr11:67204800-67209800 Genic enhancers Right Ventricle heart
23 chr11:67205000-67209800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr11:67205200-67208600 Strong transcription Fetal Intestine Small intestine
25 chr11:67205200-67208800 Strong transcription Placenta Amnion Placenta Amnion
26 chr11:67205200-67209800 Genic enhancers Placenta Placenta
27 chr11:67205400-67209400 Weak transcription K562 blood
28 chr11:67205400-67209600 Strong transcription HUES6 Cell Line embryonic stem cell
29 chr11:67205400-67209800 Weak transcription NH-A brain
30 chr11:67205600-67208800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr11:67205600-67209800 Strong transcription iPS-15b Cell Line embryonic stem cell
32 chr11:67205600-67209800 Genic enhancers Stomach Smooth Muscle stomach
33 chr11:67205600-67210000 Weak transcription Brain Angular Gyrus brain
34 chr11:67205600-67210200 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr11:67205600-67210400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
36 chr11:67205800-67209800 Strong transcription HUES48 Cell Line embryonic stem cell
37 chr11:67205800-67211200 Enhancers Primary B cells from cord blood blood
38 chr11:67206000-67209800 Genic enhancers Gastric stomach
39 chr11:67206200-67209400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr11:67206200-67209400 Genic enhancers Esophagus oesophagus
41 chr11:67206200-67209800 Genic enhancers Primary hematopoietic stem cells short term culture blood
42 chr11:67206200-67209800 Strong transcription Fetal Stomach stomach
43 chr11:67206200-67210200 Genic enhancers Fetal Muscle Trunk muscle
44 chr11:67206200-67210200 Genic enhancers Spleen Spleen
45 chr11:67206400-67209800 Genic enhancers Thymus Thymus
46 chr11:67206600-67209600 Strong transcription HUES64 Cell Line embryonic stem cell
47 chr11:67206600-67209800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr11:67206600-67209800 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr11:67206600-67209800 Genic enhancers Skeletal Muscle Male skeletal muscle
50 chr11:67206800-67209600 Strong transcription H1 Cell Line embryonic stem cell

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