The 2.0 version of rSNPBase

Variant report

Variant rs59022439
Chromosome Location chr2:231519587-231519588
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:231509600-231521600 Weak transcription Primary B cells from peripheral blood blood
2 chr2:231509800-231521000 Weak transcription Primary T helper cells fromperipheralblood blood
3 chr2:231515400-231523200 Weak transcription Skeletal Muscle Male skeletal muscle
4 chr2:231515800-231520600 Enhancers K562 blood
5 chr2:231515800-231523400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr2:231515800-231523400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr2:231515800-231524200 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr2:231515800-231528800 Weak transcription Brain Hippocampus Middle brain
9 chr2:231516200-231521600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr2:231517600-231522000 Weak transcription Adipose Nuclei Adipose
11 chr2:231518400-231519600 Enhancers Fetal Thymus thymus
12 chr2:231518600-231519800 Enhancers Primary T cells from cord blood blood
13 chr2:231518600-231519800 Enhancers Primary T killer naive cells fromperipheralblood blood
14 chr2:231518600-231534600 Enhancers Primary T cells fromperipheralblood blood
15 chr2:231518800-231519600 Enhancers Primary Natural Killer cells fromperipheralblood blood
16 chr2:231518800-231519800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr2:231518800-231520000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
18 chr2:231518800-231520800 Enhancers H1 Cell Line embryonic stem cell
19 chr2:231518800-231520800 Enhancers HUES48 Cell Line embryonic stem cell
20 chr2:231518800-231521000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
21 chr2:231518800-231521400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr2:231519000-231519600 Enhancers iPS-15b Cell Line embryonic stem cell
23 chr2:231519000-231519600 Enhancers Breast Myoepithelial Primary Cells Breast
24 chr2:231519000-231519600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
25 chr2:231519000-231519600 Enhancers GM12878-XiMat blood
26 chr2:231519000-231519800 Enhancers HUES6 Cell Line embryonic stem cell
27 chr2:231519000-231519800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
28 chr2:231519000-231520000 Enhancers iPS-20b Cell Line embryonic stem cell
29 chr2:231519000-231522000 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr2:231519200-231520000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr2:231519200-231520000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr2:231519200-231520400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr2:231519200-231520800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
34 chr2:231519200-231521400 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr2:231519200-231521400 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr2:231519200-231521400 Weak transcription Primary T helper cells PMA-I stimulated --
37 chr2:231519200-231521600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
38 chr2:231519200-231522200 Weak transcription Esophagus oesophagus
39 chr2:231519400-231519600 Enhancers Primary T helper naive cells fromperipheralblood blood
40 chr2:231519400-231519800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr2:231519400-231519800 Weak transcription Placenta Placenta
42 chr2:231519400-231520000 Enhancers HUES64 Cell Line embryonic stem cell
43 chr2:231519400-231522800 Weak transcription Thymus Thymus

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Last update: Aug 31, 2015