The 2.0 version of rSNPBase

Variant report

Variant rs59038982
Chromosome Location chr2:33779917-33779918
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:33738600-33782800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr2:33740800-33790000 Weak transcription Primary T helper cells PMA-I stimulated --
3 chr2:33747800-33780200 Weak transcription Brain Anterior Caudate brain
4 chr2:33748000-33790400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr2:33748200-33780200 Weak transcription Brain Angular Gyrus brain
6 chr2:33757000-33780000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr2:33757200-33809800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr2:33760800-33782200 Weak transcription Brain Substantia Nigra brain
9 chr2:33760800-33783600 Weak transcription Brain Cingulate Gyrus brain
10 chr2:33761000-33789000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr2:33761200-33783800 Weak transcription Psoas Muscle Psoas
12 chr2:33762000-33780200 Weak transcription Ovary ovary
13 chr2:33762200-33809800 Weak transcription Aorta Aorta
14 chr2:33763200-33780200 Weak transcription Brain Inferior Temporal Lobe brain
15 chr2:33765600-33784400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr2:33766800-33809800 Weak transcription Rectal Smooth Muscle rectum
17 chr2:33772600-33791000 Strong transcription GM12878-XiMat blood
18 chr2:33772600-33793400 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr2:33774000-33790200 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr2:33775600-33783400 Weak transcription Stomach Smooth Muscle stomach
21 chr2:33776000-33809800 Weak transcription Pancreas Pancrea
22 chr2:33776200-33780000 Weak transcription Brain Hippocampus Middle brain
23 chr2:33776200-33782800 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr2:33776800-33790600 Weak transcription Duodenum Mucosa Duodenum
25 chr2:33777600-33780000 Enhancers HUVEC blood vessel
26 chr2:33777800-33783000 Weak transcription ES-WA7 Cell Line embryonic stem cell
27 chr2:33778000-33780000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr2:33778000-33780000 Weak transcription NHDF-Ad bronchial
29 chr2:33778000-33781000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr2:33778000-33783600 Weak transcription Fetal Intestine Small intestine
31 chr2:33778000-33785200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr2:33778200-33784800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr2:33778400-33780000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr2:33778400-33796800 Weak transcription Liver Liver
35 chr2:33778400-33806400 Weak transcription Primary T cells from cord blood blood
36 chr2:33778400-33807600 Weak transcription NH-A brain
37 chr2:33778400-33808600 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr2:33778600-33780000 Weak transcription HUES6 Cell Line embryonic stem cell
39 chr2:33778600-33780000 Weak transcription HUES64 Cell Line embryonic stem cell
40 chr2:33778800-33780200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr2:33778800-33780200 Weak transcription HUES48 Cell Line embryonic stem cell
42 chr2:33779000-33780600 Enhancers Primary monocytes fromperipheralblood blood
43 chr2:33779200-33780600 Genic enhancers Primary B cells from peripheral blood blood
44 chr2:33779200-33780600 Enhancers Left Ventricle heart
45 chr2:33779200-33780600 Enhancers Right Atrium heart
46 chr2:33779200-33781000 Enhancers Fetal Adrenal Gland Adrenal Gland
47 chr2:33779400-33780400 Enhancers Adipose Nuclei Adipose
48 chr2:33779400-33780400 Enhancers Spleen Spleen
49 chr2:33779400-33783200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr2:33779600-33780600 Enhancers Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015