Variant report

Variant rs59045998
Chromosome Location chr2:33246941-33246942
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:33241200-33248000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
2 chr2:33241200-33249800 Weak transcription Esophagus oesophagus
3 chr2:33241400-33247000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr2:33241400-33247000 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr2:33241800-33247600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr2:33241800-33248000 Weak transcription Duodenum Mucosa Duodenum
7 chr2:33241800-33248600 Weak transcription Small Intestine intestine
8 chr2:33241800-33248600 Weak transcription Stomach Mucosa stomach
9 chr2:33241800-33249600 Weak transcription Fetal Muscle Leg muscle
10 chr2:33242200-33249600 Weak transcription Liver Liver
11 chr2:33242600-33248600 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr2:33242600-33249600 Weak transcription Right Ventricle heart
13 chr2:33244000-33248600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr2:33244000-33249800 Weak transcription Left Ventricle heart
15 chr2:33244800-33247600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
16 chr2:33245600-33247200 Enhancers Fetal Intestine Small intestine
17 chr2:33245800-33247000 Enhancers iPS-18 Cell Line embryonic stem cell
18 chr2:33245800-33247000 Enhancers iPS-20b Cell Line embryonic stem cell
19 chr2:33245800-33247200 Enhancers HUES6 Cell Line embryonic stem cell
20 chr2:33245800-33247400 Enhancers HUES48 Cell Line embryonic stem cell
21 chr2:33245800-33247400 Enhancers Cortex derived primary cultured neurospheres brain
22 chr2:33245800-33247600 Enhancers HUES64 Cell Line embryonic stem cell
23 chr2:33245800-33247600 Flanking Active TSS HUVEC blood vessel
24 chr2:33245800-33248000 Enhancers A549 lung
25 chr2:33245800-33249200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr2:33245800-33249200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
27 chr2:33245800-33249800 Enhancers Primary hematopoietic stem cells blood
28 chr2:33245800-33249800 Enhancers Fetal Heart heart
29 chr2:33245800-33250000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr2:33246000-33247200 Enhancers Brain Germinal Matrix brain
31 chr2:33246000-33247400 Enhancers ES-I3 Cell Line embryonic stem cell
32 chr2:33246000-33247400 Flanking Active TSS K562 blood
33 chr2:33246000-33248800 Enhancers Fetal Stomach stomach
34 chr2:33246000-33249600 Enhancers Primary hematopoietic stem cells short term culture blood
35 chr2:33246000-33249600 Enhancers NH-A brain
36 chr2:33246200-33247000 Weak transcription Aorta Aorta
37 chr2:33246200-33247000 Weak transcription Fetal Kidney kidney
38 chr2:33246200-33249200 Enhancers NHLF lung
39 chr2:33246200-33250200 Weak transcription H1 Cell Line embryonic stem cell
40 chr2:33246400-33247000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr2:33246400-33248800 Weak transcription Fetal Intestine Large intestine
42 chr2:33246400-33258800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr2:33246400-33262800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr2:33246600-33247200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr2:33246600-33247200 Flanking Active TSS Stomach Smooth Muscle stomach
46 chr2:33246600-33247400 Enhancers Skeletal Muscle Male skeletal muscle
47 chr2:33246600-33248600 Weak transcription Fetal Adrenal Gland Adrenal Gland
48 chr2:33246800-33247000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr2:33246800-33247000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
50 chr2:33246800-33247000 Weak transcription Skeletal Muscle Female skeletal muscle

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