Variant report

Variant	rs59046874
Chromosome Location	chr8:64617079-64617080
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs10097618	1.00[EUR][1000 genomes]
rs10504366	1.00[EUR][1000 genomes]
rs16930574	1.00[EUR][1000 genomes]
rs16930607	1.00[EUR][1000 genomes]
rs6994036	1.00[EUR][1000 genomes]
rs7845441	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831343	chr8:64436268-64642328	Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:64616200-64617600	Enhancers	Brain Germinal Matrix	brain
2	chr8:64616200-64618000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr8:64616200-64619600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr8:64616200-64621400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr8:64616400-64617200	Enhancers	Fetal Brain Female	brain
6	chr8:64616400-64619400	Weak transcription	Rectal Smooth Muscle	rectum
7	chr8:64616600-64617800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr8:64616800-64617800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr8:64617000-64618400	Enhancers	Fetal Brain Male	brain
10	chr8:64617000-64628000	Weak transcription	Colon Smooth Muscle	Colon

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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